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Related papers: Molecular Model Checking a Temporal Logic

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Simulation models are an absolute necessity in the human and social sciences, which can only very exceptionally use experimental science methods to construct their knowledge. Models enable the simulation of social processes by replacing the…

Computers and Society · Computer Science 2020-01-06 J. Raimbault , D. Pumain

This work utilizes the plethora of work on verification of sequential programs for the purpose of verifying concurrent programs. We reduce the verification of a concurrent program to a series of verification tasks of sequential programs.…

Programming Languages · Computer Science 2021-06-03 Dan Rasin , Orna Grumberg , Sharon Shoham

On the one hand, termination analysis of logic programs is now a fairly established research topic within the logic programming community. On the other hand, non-termination analysis seems to remain a much less attractive subject. If we…

Programming Languages · Computer Science 2009-01-10 Etienne Payet , Fred Mesnard

While large language models (LLMs) with Chain-of-Thought (CoT) reasoning excel in mathematics and coding, their potential for systematic reasoning in chemistry, a domain demanding rigorous structural analysis for real-world tasks like drug…

Artificial Intelligence · Computer Science 2026-01-08 Hao Li , He Cao , Bin Feng , Yanjun Shao , Xiangru Tang , Zhiyuan Yan , Li Yuan , Yonghong Tian , Yu Li

The quality and correct functioning of software components embedded in electronic systems are of utmost concern especially for safety and mission-critical systems. Model-based testing and formal verification techniques can be employed to…

Formal Languages and Automata Theory · Computer Science 2019-01-08 Shahbaz Ali , Hailong Sun , Yongwang Zhao

A temporal logic is presented for reasoning about the correctness of timed concurrent constraint programs. The logic is based on modalities which allow one to specify what a process produces as a reaction to what its environment inputs.…

Logic in Computer Science · Computer Science 2007-05-23 F. S. de Boer , M. Gabbrielli , M. C. Meo

Mathematical modelling has a long history in the context of collective cell migration, with applications throughout development, disease and regenerative medicine. The aim of modelling in this context is to provide a framework in which to…

Quantitative Methods · Quantitative Biology 2025-06-24 Ruth E. Baker , Rebecca M. Crossley , Carles Falco , Simon F. Martina-Perez

Molecular dynamics simulations have the potential to provide atomic-level detail and insight to important questions in chemical physics that cannot be observed in typical experiments. However, simply generating a long trajectory is…

Chemical Physics · Physics 2015-06-22 Christian R. Schwantes , Robert T. McGibbon , Vijay S. Pande

Logics and model-checking have been successfully used in the last decades for modeling and verification of various types of hardware (and software) systems. While most languages and techniques emerged in a context of monolithic systems with…

Software Engineering · Computer Science 2016-07-14 Manuel Mazzara

Computational chemistry allows researchers to experiment in sillico: by running a computer simulations of a biological or chemical processes of interest. Molecular dynamics with molecular mechanics model of interactions simulates N-body…

Distributed, Parallel, and Cluster Computing · Computer Science 2014-03-03 Jana Pazúriková

Matter, especially DNA, is now programmed to carry out useful processes at the nanoscale. As these programs and processes become more complex and their envisioned safety-critical applications approach deployment, it is essential to develop…

Computer Science and Game Theory · Computer Science 2019-02-19 Jack H. Lutz , Neil Lutz , Robyn R. Lutz , Matthew R. Riley

The growing complexity of modern practical problems puts high demands on the mathematical modelling. Given that various models can be used for modelling one physical phenomenon, the role of model comparison and model choice becomes…

Category Theory · Mathematics 2021-08-16 Dmitrii Legatiuk

In [11] we defined Inf-Datalog and characterized the fragments of Monadic inf-Datalog that have the same expressive power as Modal Logic (resp. $CTL$, alternation-free Modal $\mu$-calculus and Modal $\mu$-calculus). We study here the time…

Data Structures and Algorithms · Computer Science 2016-08-16 Eugénie Foustoucos , Irene Guessarian

This paper presents a range of quantitative extensions for the temporal logic CTL. We enhance temporal modalities with the ability to constrain the number of states satisfying certain sub-formulas along paths. By selecting the combinations…

Logic in Computer Science · Computer Science 2015-07-01 François Laroussinie , Antoine Meyer , Eudes Petonnet

A continuous-time Markov chain (CTMC) execution is a continuous class of probability distributions over states. This paper proposes a probabilistic linear-time temporal logic, namely continuous-time linear logic (CLL), to reason about the…

Logic in Computer Science · Computer Science 2022-04-15 Ji Guan , Nengkun Yu

Particle-style token machines are a way to interpret proofs and programs, when the latter are written following the principles of linear logic. In this paper, we show that token machines also make sense when the programs at hand are those…

Logic in Computer Science · Computer Science 2015-02-18 Ugo Dal Lago , Margherita Zorzi

On one hand, termination analysis of logic programs is now a fairly established research topic within the logic programming community. On the other hand, non-termination analysis seems to remain a much less attractive subject. If we divide…

Programming Languages · Computer Science 2007-05-23 Etienne Payet , Fred Mesnard

Statistical methods are based on model assumptions, and it is statistical folklore that a method's model assumptions should be checked before applying it. This can be formally done by running one or more misspecification tests of model…

Methodology · Statistics 2023-04-18 M. Iqbal Shamsudheen , Christian Hennig

Computer systems can be found everywhere: in space, in our homes, in our cars, in our pockets, and sometimes even in our own bodies. For concerns of safety, economy, and convenience, it is important that such systems work correctly.…

Logic in Computer Science · Computer Science 2019-05-22 Mathias Ruggaard Pedersen

We identify a subproblem of the model-checking problem for the epistemic \mu-calculus which is decidable. Formulas in the instances of this subproblem allow free variables within the scope of epistemic modalities in a restricted form that…

Computer Science and Game Theory · Computer Science 2013-10-28 Rodica Bozianu , Catalin Dima , Constantin Enea