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A self-organizing approach is proposed for gene finding based on the model of codon usage for coding regions and positional preference for noncoding regions. The symmetry between the direct and reverse coding regions is adopted for reducing…

Biological Physics · Physics 2007-05-23 Fang Wu , Wei-Mou Zheng

The biological immune system is a robust, complex, adaptive system that defends the body from foreign pathogens. It is able to categorize all cells (or molecules) within the body as self-cells or non-self cells. It does this with the help…

Artificial Intelligence · Computer Science 2010-07-05 Uwe Aickelin , Dipankar Dasgupta

Motivation: Unraveling the connection between genes and traits is crucial for solving many biological puzzles. Genes provide instructions for building cellular machinery, directing the processes that sustain life. RNA molecules and…

Quantitative Methods · Quantitative Biology 2024-02-14 Santiago Prochetto , Renata Reinheimer , Georgina Stegmayer

As a result of a hundred million years of evolution, living animals have adapted extremely well to their ecological niche. Such adaptation implies species-specific interactions with their immediate environment by processing sensory cues and…

Disordered Systems and Neural Networks · Physics 2022-04-28 Tom Birkoben , Hermann Kohlstedt

Fifty years ago, John von Neumann compared the architecture of the brain with that of computers that he invented and which is still in use today. In those days, the organisation of computers was based on concepts of brain organisation.…

Neurons and Cognition · Quantitative Biology 2008-02-28 Marcus Kaiser

To autonomously navigate in real-world environments, special in search and rescue operations, Unmanned Aerial Vehicles (UAVs) necessitate comprehensive maps to ensure safety. However, the prevalent metric map often lacks semantic…

Robotics · Computer Science 2024-01-17 Thanh Nguyen Canh , Armagan Elibol , Nak Young Chong , Xiem HoangVan

The paper proposes a text-mining based analytical framework aiming at the cognitive organization of complex scientific discourses. The approach is based on models recently developed in science mapping, being a generalization of the…

Digital Libraries · Computer Science 2015-04-23 Sandor Soos

Information security is of great importance for modern society with all things connected. Physical unclonable function (PUF) as a promising hardware primitive has been intensively studied for information security. However, the widely…

Cryptography and Security · Computer Science 2021-09-09 Yongbiao Wan , Pidong Wang , Feng Huang , Jun Yuan , Dong Li , Kun Chen , Jianbin Kang , Qian Li , Taiping Zhang , Song Sun , Zhiguang Qiu , Yao Yao

Deep learning based localization and mapping approaches have recently emerged as a new research direction and receive significant attentions from both industry and academia. Instead of creating hand-designed algorithms based on physical…

Computer Vision and Pattern Recognition · Computer Science 2023-08-29 Changhao Chen , Bing Wang , Chris Xiaoxuan Lu , Niki Trigoni , Andrew Markham

Over the last decade, significant progress has been made in understanding complex biological systems, however there have been few attempts at incorporating this knowledge into nature inspired optimization algorithms. In this paper, we…

Neural and Evolutionary Computing · Computer Science 2009-07-03 James M. Whitacre , Ruhul A. Sarker , Q. Tuan Pham

This paper studies how a system operator and a set of agents securely execute a distributed projected gradient-based algorithm. In particular, each participant holds a set of problem coefficients and/or states whose values are private to…

Cryptography and Security · Computer Science 2018-05-24 Yang Lu , Minghui Zhu

We study open-ended evolution by focusing on computational and information-processing dynamics underlying major evolutionary transitions. In doing so, we consider biological organisms as hierarchical dynamical systems that generate…

A model of a geometric algorithm is introduced and methodology of its operation is presented for the dynamic partitioning of data spaces.

Data Structures and Algorithms · Computer Science 2014-12-30 Christopher A. Tucker

Computational methods are the most effective tools we have besides scientific experiments to explore the properties of complex biological systems. Progress is slowing because digital silicon computers have reached their limits in terms of…

Quantum Physics · Physics 2020-04-03 Viv Kendon

A useful approach to the mathematical analysis of large-scale biological networks is based upon their decompositions into monotone dynamical systems. This paper deals with two computational problems associated to finding decompositions…

Molecular Networks · Quantitative Biology 2007-05-23 Bhaskar DasGupta , German Andres Enciso , Eduardo Sontag , Yi Zhang

A self-organising neural network is presented that is based on a rigorous Bayesian analysis of the information contained in individual neural firing events. This leads to a visual cortex network (VICON) that has many of the properties…

Neural and Evolutionary Computing · Computer Science 2010-12-17 Stephen Luttrell

Digital Embedded Devices of next-generation safety-critical industrial automation systems require high levels of survivability and resilience against the hardware and software failure. One of the concepts for achieving this requirement is…

Other Computer Science · Computer Science 2019-10-02 Shawkat Sabah Khairullah

Security in computer networks is one of the most interesting aspects of computer systems. It is typically represented by the initials CIA: confidentiality, integrity, and authentication or availability. Although, many access levels for data…

Networking and Internet Architecture · Computer Science 2015-11-02 Jaderian Morteza , Moradzadeh Hossein , Madadipouya Kasra , Firoozinia Mohammad , Shamshirband Shahaboddin

Past experiences under the designation of "Swarm Paintings" conducted in 2001, not only confirmed the possibility of realizing an artificial art (thus non-human), as introduced into the process the questioning of creative migration,…

Multimedia · Computer Science 2007-05-23 Vitorino Ramos

Swarm intelligence optimization algorithms can be adopted in swarm robotics for target searching tasks in a 2-D or 3-D space by treating the target signal strength as fitness values. Many current works in the literature have achieved good…

Neural and Evolutionary Computing · Computer Science 2021-05-28 Jian Yang , Yuhui Shi
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