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Limits of graphs were initiated recently in the two extreme contexts of dense and bounded degree graphs. This led to elegant limiting structures called graphons and graphings. These approach have been unified and generalized by authors in a…

Combinatorics · Mathematics 2013-12-03 Jaroslav Nesetril , Patrice Ossona De Mendez

Subgraph enumeration problems ask to output all subgraphs of an input graph that belongs to the specified graph class or satisfy the given constraint. These problems have been widely studied in theoretical computer science. As far, many…

Data Structures and Algorithms · Computer Science 2018-07-03 Kunihiro Wasa , Takeaki Uno

Minimal separators in graphs are an important concept in algorithmic graph theory. In particular, many problems that are NP-hard for general graphs are known to become polynomial-time solvable for classes of graphs with a polynomially…

Combinatorics · Mathematics 2019-06-03 Martin Milanič , Nevena Pivač

In order to make more complex number-based strings from topological coding for defending against the intelligent attacks equipped with quantum computing and providing effective protection technology for the age of quantum computing, we will…

Cryptography and Security · Computer Science 2024-04-18 Bing Yao , Fei Ma

Tolerance graphs model interval relations in such a way that intervals can tolerate a certain degree of overlap without being in conflict. This subclass of perfect graphs has been extensively studied, due to both its interesting structure…

Computational Complexity · Computer Science 2010-02-03 George B. Mertzios , Ignasi Sau , Shmuel Zaks

Aboulker, Adler, Kim, Sintiari, and Trotignon conjectured that every graph with bounded maximum degree and large treewidth must contain, as an induced subgraph, a large subdivided wall, or the line graph of a large subdivided wall. This…

Combinatorics · Mathematics 2022-05-19 Bogdan Alecu , Maria Chudnovsky , Kristina Vušković

Given graphs $G$ and $H$, we propose a method to implicitly enumerate topological-minor-embeddings of $H$ in $G$ using decision diagrams. We show a useful application of our method to enumerating subgraphs characterized by forbidden…

Data Structures and Algorithms · Computer Science 2019-11-19 Yu Nakahata , Jun Kawahara , Takashi Horiyama , Shin-ichi Minato

The modular decomposition of a symmetric map $\delta\colon X\times X \to \Upsilon$ (or, equivalently, a set of symmetric binary relations, a 2-structure, or an edge-colored undirected graph) is a natural construction to capture key features…

Combinatorics · Mathematics 2021-03-12 Carmen Bruckmann , Peter F. Stadler , Marc Hellmuth

We prove algorithmic weak and \Szemeredi{} regularity lemmas for several classes of sparse graphs in the literature, for which only weak regularity lemmas were previously known. These include core-dense graphs, low threshold rank graphs,…

Data Structures and Algorithms · Computer Science 2025-05-30 Greg Bodwin , Santosh Vempala

Graph invariants are a useful tool in graph theory. Not only do they encode useful information about the graphs to which they are associated, but complete invariants can be used to distinguish between non-isomorphic graphs. Polynomial…

Combinatorics · Mathematics 2023-02-21 Leo van Iersel , Vincent Moulton , Yukihiro Murakami

Treewidth is an important graph invariant, relevant for both structural and algorithmic reasons. A necessary condition for a graph class to have bounded treewidth is the absence of large cliques. We study graph classes closed under taking…

Combinatorics · Mathematics 2021-11-09 Clément Dallard , Martin Milanič , Kenny Štorgel

In enumerative combinatorics, it is often a goal to enumerate both labeled and unlabeled structures of a given type. The theory of combinatorial species is a novel toolset which provides a rigorous foundation for dealing with the…

Combinatorics · Mathematics 2013-12-03 Andy Hardt , Pete McNeely , Tung Phan , Justin M. Troyka

Can we use machine learning to compress graph data? The absence of ordering in graphs poses a significant challenge to conventional compression algorithms, limiting their attainable gains as well as their ability to discover relevant…

Machine Learning · Computer Science 2023-09-26 Giorgos Bouritsas , Andreas Loukas , Nikolaos Karalias , Michael M. Bronstein

A split graph is a graph whose vertex set can be partitioned into a clique and an independent set. A split comparability graph is a split graph which is transitively orientable. In this work, we characterize split comparability graphs in…

Combinatorics · Mathematics 2025-04-29 Tithi Dwary , Khyodeno Mozhui , K. V. Krishna

We generalize the problem of reconstructing strings from their substring compositions first introduced by Acharya et al. in 2015 motivated by polymer-based advanced data storage systems utilizing mass spectrometry. Namely, we see strings as…

Combinatorics · Mathematics 2025-04-02 Antoine Dailly , Tuomo Lehtilä

We introduce regular graph constraints and explore their decidability properties. The motivation for regular graph constraints is 1) type checking of changing types of objects in the presence of linked data structures, 2) shape analysis…

Programming Languages · Computer Science 2007-05-23 Viktor Kuncak , Martin Rinard

The intersection graphs of stars in some tree are known as substar graphs. In this paper we give a characterization of substar graphs by the list of minimal forbidden induced subgraphs. This corrects a flaw in the main result of Chang,…

Combinatorics · Mathematics 2014-05-06 Felix Joos

Subgraph counting aims to count occurrences of a template T in a given network G(V, E). It is a powerful graph analysis tool and has found real-world applications in diverse domains. Scaling subgraph counting problems is known to be memory…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-10-06 Langshi Chen , Jiayu Li , Ariful Azad , Cenk Sahinalp , Madhav Marathe , Anil Vullikanti , Andrey Nikolaev , Egor Smirnov , Ruslan Israfilov , Judy Qiu

Let H be a graph, and let C_H(G) be the number of (subgraph isomorphic) copies of H contained in a graph G. We investigate the fundamental problem of estimating C_H(G). Previous results cover only a few specific instances of this general…

Data Structures and Algorithms · Computer Science 2019-02-20 Martin Furer , Shiva Prasad Kasiviswanathan

For fixed integers $r,\ell \geq 0$, a graph $G$ is called an {\em $(r,\ell)$-graph} if the vertex set $V(G)$ can be partitioned into $r$ independent sets and $\ell$ cliques. This brings us to the following natural parameterized questions:…

Computational Complexity · Computer Science 2015-05-05 Sudeshna Kolay , Fahad Panolan