Related papers: Hardness of Permutation Pattern Matching
The trust region subproblem with a fixed number m additional linear inequality constraints, denoted by (Tm), have drawn much attention recently. The question as to whether Problem (Tm) is in Class P or Class NP remains open. So far, the…
Frequent pattern mining is widely used to find ``important'' or ``interesting'' patterns in data. While it is not easy to mathematically define such patterns, maximal frequent patterns are promising candidates, as frequency is a natural…
A matching $M$ is a $\mathscr{P}$-matching if the subgraph induced by the endpoints of the edges of $M$ satisfies property $\mathscr{P}$. As examples, for appropriate choices of $\mathscr{P}$, the problems Induced Matching, Uniquely…
Approximate pattern matching is a natural and well-studied problem on strings: Given a text $T$, a pattern $P$, and a threshold $k$, find (the starting positions of) all substrings of $T$ that are at distance at most $k$ from $P$. We…
In pursuit of a deeper understanding of Boolean Promise Constraint Satisfaction Problems (PCSPs), we identify a class of problems with restricted structural complexity, which could serve as a promising candidate for complete…
Pattern matching is a fundamental process in almost every scientific domain. The problem involves finding the positions of a given pattern (usually of short length) in a reference stream of data (usually of large length). The matching can…
2-dimensional Matching Problem, which requires to find a matching of left- to right-vertices in a balanced $2n$-vertex bipartite graph, is a well-known polynomial problem, while various variants, like the 3-dimensional analogoue (3DM, with…
Reducing the conditions under which a given set satisfies the stipulations of the subset sum proposition to a set of linear relationships, the question of whether a set satisfies subset sum may be answered in a polynomial number of steps by…
The parameterized matching problem is a variant of string matching, which is to search for all parameterized occurrences of a pattern $P$ in a text $T$. In considering matching algorithms, the combinatorial natures of strings, especially…
For a permutation $\pi: [K]\rightarrow [K]$, a sequence $f: \{1,2,\cdots, n\}\rightarrow \mathbb R$ contains a $\pi$-pattern of size $K$, if there is a sequence of indices $(i_1, i_2, \cdots, i_K)$ ($i_1<i_2<\cdots<i_K$), satisfying that…
We systematically study the computational complexity of a broad class of computational problems in phylogenetic reconstruction. The class contains for example the rooted triple consistency problem, forbidden subtree problems, the quartet…
A matching is a set of edges in a graph with no common endpoint. A matching M is called acyclic if the induced subgraph on the endpoints of the edges in M is acyclic. Given a graph G and an integer k, Acyclic Matching Problem seeks for an…
Parameterized Inapproximability Hypothesis (PIH) is a central question in the field of parameterized complexity. PIH asserts that given as input a 2-CSP on $k$ variables and alphabet size $n$, it is W[1]-hard parameterized by $k$ to…
A pattern class is a set of permutations closed under the formation of subpermutations. Such classes can be characterised as those permutations not involving a particular set of forbidden permutations. A simple collection of necessary and…
Given a pattern string $P$ of length $n$ and a query string $T$ of length $m$, where the characters of $P$ and $T$ are drawn from an alphabet of size $\Delta$, the {\em exact string matching} problem consists of finding all occurrences of…
Given a set $\Pi$ of permutation patterns of length at most $k$, we present an algorithm for building $S_{\le n}(\Pi)$, the set of permutations of length at most $n$ avoiding the patterns in $\Pi$, in time $O(|S_{\le n - 1}(\Pi)| \cdot k +…
The article studies segmentation problem (also known as classification problem) with pairwise Markov models (PMMs). A PMM is a process where the observation process and underlying state sequence form a two-dimensional Markov chain, it is a…
In a graph, a matching cut is an edge cut that is a matching. Matching Cut is the problem of deciding whether or not a given graph has a matching cut, which is known to be NP-complete even when restricted to bipartite graphs. It has been…
This paper presents the following results on sets that are complete for NP. 1. If there is a problem in NP that requires exponential time at almost all lengths, then every many-one NP-complete set is complete under length-increasing…
We define and study positional marked patterns, permutations $\tau$ where one of elements in $\tau$ is underlined. Given a permutation $\sigma$, we say that $\sigma$ has a $\tau$-match at position $i$ if $\tau$ occurs in $\sigma$ in such a…