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This work focuses on clustering populations with a hierarchical dependency structure that can be described by a tree. A particular example that is the focus of our work is the phylogenetic tree, with nodes often representing biological…

Methodology · Statistics 2023-02-28 Hanxi Sun , Heejung Shim , Vinayak Rao

The goal of data clustering is to partition data points into groups to minimize a given objective function. While most existing clustering algorithms treat each data point as vector, in many applications each datum is not a vector but a…

Machine Learning · Statistics 2017-03-16 Dinh Phung , Ba-Ngu Bo

We consider a fractional counting process with jumps of amplitude $1,2,\ldots,k$, with $k\in \mathbb{N}$, whose probabilities satisfy a suitable system of fractional difference-differential equations. We obtain the moment generating…

Probability · Mathematics 2016-03-10 Antonio Di Crescenzo , Barbara Martinucci , Alessandra Meoli

The beta-negative binomial process (BNBP), an integer-valued stochastic process, is employed to partition a count vector into a latent random count matrix. As the marginal probability distribution of the BNBP that governs the exchangeable…

Methodology · Statistics 2015-01-05 Mingyuan Zhou

We wish to estimate the total number of classes in a population based on sample counts, especially in the presence of high latent diversity. Drawing on probability theory that characterizes distributions on the integers by ratios of…

Methodology · Statistics 2014-12-10 A. Willis , J. Bunge

Consider a class of decomposable combinatorial structures, using different types of atoms $\Atoms = \{\At_1,\ldots ,\At_{|{\Atoms}|}\}$. We address the random generation of such structures with respect to a size $n$ and a targeted…

Discrete Mathematics · Computer Science 2010-12-01 Alain Denise , Yann Ponty , Michel Termier

We develop a novel clustering method for distributional data, where each data point is regarded as a probability distribution on the real line. For distributional data, it has been challenging to develop a clustering method that utilizes…

Methodology · Statistics 2025-06-24 Ryo Okano , Masaaki Imaizumi

We examine genetic statistics used in the study of structured populations. In a 1999 paper, Wakeley observed that the coalescent process associated with the finite island model can be decomposed into a scattering phase and a collecting…

Populations and Evolution · Quantitative Biology 2008-11-11 Sivan Leviyang

A stochastic model for intermittent fluctuations in the scrape-off layer of magnetically confined plasmas has been constructed based on a super-position of uncorrelated pulses arriving according to a Poisson process. In the most common…

Plasma Physics · Physics 2018-05-04 Audun Theodorsen , Odd Erik Garcia

Despite the inherent lack of a ground truth in clustering, a broad consensus is overall acknowledged in defining the concept of cluster in the continuous setting. Conversely, this remains controversial in the presence of categorical data.…

Methodology · Statistics 2025-02-24 Noemi Corsini , Giovanna Menardi

This paper studies a factor modeling-based approach for clustering high-dimensional data generated from a mixture of strongly correlated variables. Statistical modeling with correlated structures pervades modern applications in economics,…

Statistics Theory · Mathematics 2024-08-23 Shange Tang , Soham Jana , Jianqing Fan

This paper describes a compound Poisson-based random effects structure for modeling zero-inflated data. Data with large proportion of zeros are found in many fields of applied statistics, for example in ecology when trying to model and…

Applications · Statistics 2009-07-29 Marie-Pierre Etienne , Eric Parent , Benoit Hugues , Bernier Jacques

Anomalous coarsening in far-from equilibrium one-dimensional systems is investigated by simulation and analytic techniques. The minimal hard core particle (exclusion) models contain mechanisms of aggregated particle diffusion, with rates…

Statistical Mechanics · Physics 2009-11-10 Fabio D. A. Aarao Reis , Robin B. Stinchcombe

Multivariate count data are commonly encountered through high-throughput sequencing technologies in bioinformatics, text mining, or in sports analytics. Although the Poisson distribution seems a natural fit to these count data, its…

Computation · Statistics 2020-04-16 Sanjeena Subedi , Ryan Browne

We define the beta diffusion tree, a random tree structure with a set of leaves that defines a collection of overlapping subsets of objects, known as a feature allocation. A generative process for the tree structure is defined in terms of…

Machine Learning · Statistics 2015-04-06 Creighton Heaukulani , David A. Knowles , Zoubin Ghahramani

A task of clustering data given in the ordinal scale under conditions of overlapping clusters has been considered. It's proposed to use an approach based on memberhsip and likelihood functions sharing. A number of performed experiments…

Machine Learning · Computer Science 2017-02-07 Zhengbing Hu , Yevgeniy V. Bodyanskiy , Oleksii K. Tyshchenko , Viktoriia O. Samitova

Random partition distribution is a crucial tool for model-based clustering. This study advances the field of random partition in the context of functional spatial data, focusing on the challenges posed by hourly population data across…

Methodology · Statistics 2025-06-05 Tomoya Wakayama , Shonosuke Sugasawa , Genya Kobayashi

We propose a simple model for periodic clustering of particles under forced oscillation. Effective viscosity is assumed to increase owing to neighboring particles by analogy with the Einstein viscosity law. The linear stability analysis and…

Pattern Formation and Solitons · Physics 2026-02-12 Hidetsugu Sakaguchi

We propose a simple, projection-based algorithm for clustering mixtures of discrete (Bernoulli) distributions. Unlike previous approaches that rely on coordinate-specific ``combinatorial projections,'' our algorithm is rotationally…

Data Structures and Algorithms · Computer Science 2026-04-28 Pradipta Mitra

Communities are clusters of nodes with a higher than average density of internal connections. Their detection is of great relevance to better understand the structure and hierarchies present in a network. Modularity has become a standard…

Physics and Society · Physics 2015-03-17 Filippo Radicchi , Andrea Lancichinetti , José J. Ramasco