Related papers: Aggregation Dynamics Using Phase Wave Signals and …
Colonies of bacteria endowed with a pili-based self-propulsion machinery are ideal models for investigating the structure and dynamics of active many-particle systems. We study Neisseria gonorrhoeae colonies with a molecular-dynamics-based…
Spiral waves are a well-known phenomenon in excitable media, playing critical roles in biological systems such as cardiac tissues, where they are involved in arrhythmias, and in slime molds, where they guide collective cell migration.…
We show that a scaling approach successfully characterizes clustering and intermittency in space and time, in systems of noninteracting particles driven by fluctuating surfaces. We study both the steady state and the approach to it, for…
We undertake a systematic numerical exploration of self-organized states in a deterministic model of interacting self-propelled particles in two dimensions. In the process, we identify various types of collective motion, namely, disordered…
Sheep are gregarious animals, and they often aggregate into dense, cohesive flocks, especially under stress. In this paper, we use image processing tools to analyze a publicly available aerial video showing a dense sheep flock moving under…
Similarly-charged polyelectrolytes are known to attract each other and aggregate into bundles when the charge density of the polymers exceeds a critical value that depends on the valency of the counterions. The dynamics of aggregation of…
Molecular dynamics simulations have been performed on pure liquid water, aqueous solutions of sodium chloride, and polymer solutions exposed to a strong external electric field with the goal to gain molecular insight into the structural…
We investigate the aggregation kinetics of sedimenting particles theoretically and numerically, using the advection-diffusion equation. Agglomeration, caused by both transport mechanisms (diffusion and advection), is important for small…
To mimic the mechanical response of passive biological cilia in complex fluids, we study the bending dynamics of an anchored elastic fiber submitted to a dilute granular suspension under shear. We show that the bending fluctuations of the…
We introduce an aggregation process based on \emph{templating}, where a specified number of constituent clusters must assemble on a larger aggregate, which serves as a scaffold, for a reaction to occur. A simple example is a dimer scaffold,…
We use numerial simulations to study the absorption and phase shift of surface-gravity waves caused by groups of magnetic flux tubes. The dependence of the scattering coefficients with the distance between the tubes and their positions is…
Ciliated tissues such as in the mammalian lungs, brains, and reproductive tracts, are specialized to pump fluid. They generate flows by the collective activity of hundreds of thousands of individual cilia that beat in a striking metachronal…
I study the confinement-induced aggregation phenomenon in a minimal model of self-propelled particles inside a channel. Starting from first principles, I derive a set of equations that govern the density profile of such a system at the…
Membrane shape fluctuations induce attractive interactions between rigid inclusions. Previous analytical studies showed that the fluctuation-induced pair interactions are rather small compared to thermal energies, but also that multi-body…
The gravitational instability of expanding shells is discussed. Linear and nonlinear terms are included in an analytical solution in the static and homogeneous medium. We discuss the interaction of modes and give the time needed for…
We study the distribution of swimming micro-organisms advected by a model turbulent flow and attracted towards a localised light source through phototaxis. It is shown that particles aggregate along a dynamical attractor with fractal…
In many complex systems, states and interaction structure coevolve towards a dynamic equilibrium. For the adaptive contact process, we obtain approximate expressions for the degree distributions that characterize the interaction network in…
We investigate the interplay of phase mixing and the nonlinear turbulent cascade in the evolution and dissipation of Alfv\'en waves using compressible magnetohydrodynamics numerical simulations. We consider perturbations in the form of…
In this article, we investigate the convergence behavior of two classes of gathering protocols with fixed circulant topologies using tools from dynamical systems. Given a fixed number of mobile entities moving in the Euclidean plane, we…
Alfvenic waves are thought to play an important role in coronal heating and solar wind acceleration. Recent observations by Hinode/SOT showed that the spicules mostly exhibit upward propagating high frequency waves. Here we investigate the…