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The importance of graph search algorithm choice to the directed relation graph with error propagation (DRGEP) method is studied by comparing basic and modified depth-first search, basic and R-value-based breadth-first search (RBFS), and…

Data Structures and Algorithms · Computer Science 2016-06-28 Kyle E. Niemeyer , Chih-Jen Sung

A detailed mechanism for the four-component RD387 gasoline surrogate developed by Lawrence Livermore National Laboratory has shown good agreement with experiments in engine-relevant conditions. However, with 1388 species and 5933 reversible…

Chemical Physics · Physics 2015-04-15 Kyle E. Niemeyer , Chih-Jen Sung

Strategies and recommendations for performing skeletal reductions of multicomponent surrogate fuels are presented, through the generation and validation of skeletal mechanisms for a three-component toluene reference fuel. Using the directed…

Chemical Physics · Physics 2014-09-29 Kyle E Niemeyer , Chih-Jen Sung

Reduction of detailed chemical reaction mechanisms is one of the key methods for mitigating the computational cost of reactive flow simulations. Exploitation of species and elementary reaction sparsity ensures the compactness of the reduced…

Chemical Physics · Physics 2024-10-15 Shen Fang , Siyi Zhang , Zeyu Li , Qingfei Fu , Chong-Wen Zhou , Wang Hana , Lijun Yang

Skeletal reaction models are derived for a four-component gasoline surrogate model via an instantaneous local sensitivity analysis technique. The sensitivities of the species mass fractions and the temperature with respect to the reaction…

Computational Engineering, Finance, and Science · Computer Science 2025-06-24 Yinmin Liu , Hessam Babaee , Peyman Givi , Daniel Livescu , Arash Nouri

Direct numerical simulations of turbulent reacting flows involving millions of grid points and detailed chemical mechanisms with hundreds of species and thousands of reactions are computationally prohibitive. To address this challenge, we…

Machine Learning · Computer Science 2026-03-25 Manuru Nithin Padiyar , Priyabrat Dash , Konduri Aditya

The relative importance index (RII) method for determining appropriate target species for dynamic adaptive chemistry (DAC) simulations using the DRGEP method is developed. The accuracy and effectiveness of this RII method is validated for…

Chemical Physics · Physics 2018-04-06 Nicholas Curtis , Kyle Niemeyer , Chih-Jen Sung

A novel methodology is developed to extract accurate skeletal reaction models for nuclear combustion. Local sensitivities of isotope mass fractions with respect to reaction rates are modeled based on the forced optimally time-dependent…

Solar and Stellar Astrophysics · Physics 2024-04-29 A. G. Nouri , Y. Liu , P. Givi , H. Babaee , D. Livescu

New multipurpose skeletal and reduced chemical-kinetic mechanisms for ethanol combustion are developed, along the same philosophical lines followed in our previous work on methanol. The resulting skeletal mechanism contains 66 reactions,…

A local-sensitivity-analysis technique is employed to generate new skeletal reaction models for methane combustion from the foundational fuel chemistry model (FFCM-1). The sensitivities of the thermo-chemical variables with respect to the…

Chemical Physics · Physics 2023-08-30 Yinmin Liu , Hessam Babaee , Peyman Givi , Harsha Chelliah , Daniel Livescu , Arash Nouri

We develop a systematic approach for surrogate model construction in reduced input parameter spaces. A sparse set of model evaluations in the original input space is used to approximate derivative based global sensitivity measures (DGSMs)…

Applications · Statistics 2018-06-19 Manav Vohra , Alen Alexanderian , Cosmin Safta , Sankaran Mahadevan

Butanol has received significant research attention as a second-generation biofuel in the past few years. In the present study, skeletal mechanisms for four butanol isomers were generated from two widely accepted, well-validated detailed…

Chemical Physics · Physics 2017-06-08 Xin Hui , Kyle E. Niemeyer , Kyle B. Brady , Chih-Jen Sung

Chemical kinetics mechanisms are essential for understanding, analyzing, and simulating complex combustion phenomena. In this study, a Neural Ordinary Differential Equation (Neural ODE) framework is employed to optimize kinetics parameters…

Chemical Physics · Physics 2022-09-07 Xingyu Su , Weiqi Ji , Jian An , Zhuyin Ren , Sili Deng , Chung K. Law

In the domain of emotion recognition using body motion, the primary challenge lies in the scarcity of diverse and generalizable datasets. Automatic emotion recognition uses machine learning and artificial intelligence techniques to…

Computer Vision and Pattern Recognition · Computer Science 2025-03-20 Seyed Muhammad Hossein Mousavi

Longitudinal gene expression profiles of patients are collected in some clinical studies to monitor disease progression and understand disease etiology. The identification of gene sets that have coordinated changes with relevant clinical…

Methodology · Statistics 2016-09-27 Jiehuan Sun , Jose D. Herazo-Maya , Xiu Huang , Naftali Kaminski , Hongyu Zhao

Coarse-grained output from transport calculations is used to determine thermal dilepton emission rates by applying medium-modified spectral functions from thermal quantum field theoretical models. By averaging over an ensemble of events…

Nuclear Theory · Physics 2015-05-27 Stephan Endres , Hendrik van Hees , Janus Weil , Marcus Bleicher

Elucidating physical mechanisms with statistical confidence from molecular dynamics simulations can be challenging owing to the many degrees of freedom that contribute to collective motions. To address this issue, we recently introduced a…

Data Analysis, Statistics and Probability · Physics 2020-09-10 John Strahan , Adam Antoszewski , Chatipat Lorpaiboon , Bodhi P. Vani , Jonathan Weare , Aaron R. Dinner

We present a new implementation of the driven similarity renormalization group (DSRG) based on a density matrix renormalization group (DMRG) reference. The explicit build of high-order reduced density matrices is avoided by forming…

Chemical Physics · Physics 2025-03-04 Chenyang Li , Xiaoxue Wang , Huanchen Zhai , Wei-Hai Fang

The Gillespie algorithm is commonly used to simulate and analyze complex chemical reaction networks. Here, we leverage recent breakthroughs in deep learning to develop a fully differentiable variant of the Gillespie algorithm. The…

Biological Physics · Physics 2025-01-22 Krishna Rijal , Pankaj Mehta

A third-order multireference perturbation theory based on the driven similarity renormalization group approach (DSRG-MRPT3) is presented. The DSRG-MRPT3 method has several appealing features: a) it is intruder free, b) it is size…

Chemical Physics · Physics 2017-04-26 Chenyang Li , Francesco A. Evangelista
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