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We use a generalised version of the individual-based Tangled Nature model of evolutionary ecology to study the relationship between ecosystem structure and evolutionary history. Our evolved model ecosystems typically exhibit interaction…

Populations and Evolution · Quantitative Biology 2007-05-23 Simon Laird , Henrik Jeldtoft Jensen

One of the central questions of metacommunity theory is how dispersal of organisms affects species diversity. Here we show that the diversity-dispersal relationship should not be studied in isolation of other abiotic and biotic flows in the…

Populations and Evolution · Quantitative Biology 2014-02-12 Bart Haegeman , Michel Loreau

The robustness of an ecological network quantifies the resilience of the ecosystem it represents to species loss. It corresponds to the proportion of species that are disconnected from the rest of the network when extinctions occur…

Populations and Evolution · Quantitative Biology 2021-11-25 Saint-Clair Chabert-Liddell , Pierre Barbillon , Sophie Donnet

We study the (hydro-)dynamics of multi-species driven by alignment. What distinguishes the different species is the protocol of their interaction with the rest of the crowd: the collective motion is described by different communication…

Analysis of PDEs · Mathematics 2020-10-20 Siming He , Eitan Tadmor

Cooperation is a persistent behavioral pattern of entities pooling and sharing resources. Its ubiquity in nature poses a conundrum. Whenever two entities cooperate, one must willingly relinquish something of value to the other. Why is this…

Adaptation and Self-Organizing Systems · Physics 2022-05-24 Ole Peters , Alexander Adamou

The population size ("abundance") of wildlife species has central interest in ecological research and management. Distance sampling is a dominant approach to the estimation of wildlife abundance for many vertebrate animal species. One…

Methodology · Statistics 2025-04-18 Benjamin R. Baer , Len Thomas , Stephen T. Buckland

The far-reaching consequences of ecological interactions in the dynamics of biological communities remain an intriguing subject. For decades, competition has been a cornerstone in ecological processes, but mounting evidence shows that…

Populations and Evolution · Quantitative Biology 2021-07-19 F. Meloni , G. Nakamura , B. Grammaticos , A. S. Martinez , M. Badoual

In biology, the evolution of increasingly cooperative groups has shaped the history of life. Genes collaborate in the control of cells; cells efficiently divide tasks to produce cohesive multicellular individuals; individual members of…

Populations and Evolution · Quantitative Biology 2011-12-15 Steven A. Frank

Science is increasingly dominated by teams. Understanding patterns of scientific collaboration and their impacts on the productivity and evolution of disciplines is crucial to understand scientific processes. Electronic bibliography offers…

Physics and Society · Physics 2014-09-17 Qing Ke , Yong-Yeol Ahn

Commonly recognized evolutionarily relevant effects of sexual reproduction include increased diversity, accelerated adaptation, and constrained accumulation of deleterious mutations, along with a secondary effect of species genotype…

Populations and Evolution · Quantitative Biology 2025-06-17 Assaf Marron , Smadar Szekely , Irun R. Cohen , David Harel

Evolutionary adaptation is the process that increases the fit of a population to the fitness landscape it inhabits. As a consequence, evolutionary dynamics is shaped, constrained, and channeled, by that fitness landscape. Much work has been…

Populations and Evolution · Quantitative Biology 2010-12-17 Bjørn Østman , Arend Hintze , Christoph Adami

Organisms from microbes to humans engage in a variety of social behaviors, which affect fitness in complex, often nonlinear ways. The question of how these behaviors evolve has consequences ranging from antibiotic resistance to human…

Populations and Evolution · Quantitative Biology 2024-06-17 Benjamin Allen , Abdur-Rahman Khwaja , James L. Donahue , Cassidy Lattanzio , Yulia A. Dementieva , Christine Sample

Many complex systems are characterized by broad distributions capturing, for example, the size of firms, the population of cities or the degree distribution of complex networks. Typically this feature is explained by means of a preferential…

Physics and Society · Physics 2012-02-29 Przemyslaw A. Grabowicz , Victor M. Eguiluz

This is an introduction to the special issue titled "Collective behavior and evolutionary games" that is in the making at Chaos, Solitons & Fractals. The term collective behavior covers many different phenomena in nature and society. From…

Physics and Society · Physics 2013-07-01 Matjaz Perc , Paolo Grigolini

Global environmental change is affecting species distribution and their interactions with other species. In particular, the main drivers of environmental change strongly affect the strength of interspecific interactions with considerable…

Populations and Evolution · Quantitative Biology 2013-08-19 Serguei Saavedra , Rudolf P. Rohr , Vasilis Dakos , Jordi Bascompte

We consider the concept of mutual information in ecological networks, and use this idea to analyse the Tangled Nature model of co-evolution. We show that this measure of correlation has two distinct behaviours depending on how we define the…

Populations and Evolution · Quantitative Biology 2009-11-02 Dominic Jones , Henrik Jeldtoft Jensen , Paolo Sibani

Microbial ecosystems are remarkably diverse, stable, and often consist of a balanced mixture of core and peripheral species. Here we propose a conceptual model exhibiting all these emergent properties in quantitative agreement with real…

Populations and Evolution · Quantitative Biology 2018-04-18 Akshit Goyal , Sergei Maslov

The abundance of different species in a community often follows the log series distribution. Other ecological patterns also have simple forms. Why does the complexity and variability of ecological systems reduce to such simplicity? Common…

Populations and Evolution · Quantitative Biology 2019-08-21 Steven A. Frank , Jordi Bascompte

Social interaction increases significantly the performance of a wide range of cooperative systems. However, evidence that natural swarms limit the number of social connections suggests potentially detrimental consequences of excessive…

Adaptation and Self-Organizing Systems · Physics 2016-09-09 David Mateo , Yoke Kong Kuan , Roland Bouffanais

We consider the population dynamics of a set of species whose network of catalytic interactions is described by a directed graph. The relationship between the attractors of this dynamics and the underlying graph theoretic structures like…

adap-org · Physics 2009-10-30 Sanjay Jain , Sandeep Krishna