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Nonlinear dynamic models are widely used for characterizing functional forms of processes that govern complex biological pathway systems. Over the past decade, validation and further development of these models became possible due to data…

Methodology · Statistics 2019-08-13 Itai Dattner , Shota Gugushvili , Harold Ship , Eberhard O. Voit

In this paper, a practicable simulation-free model order reduction method by nonlinear moment matching is developed. Based on the steady-state interpretation of linear moment matching, we comprehensively explain the extension of this…

Systems and Control · Electrical Eng. & Systems 2024-12-20 Maria Cruz Varona , Raphael Gebhart , Julian Suk , Boris Lohmann

The solution of systems of linear(ized) equations lies at the heart of many problems in Scientific Computing. In particular for systems of large dimension, iterative methods are a primary approach. Stationary iterative methods are generally…

Numerical Analysis · Mathematics 2025-04-08 Andy Wathen

Several different approaches are proposed for solving fully implicit discretizations of a simplified Boltzmann-Poisson system with a linear relaxation-type collision kernel. This system models the evolution of free electrons in…

Computational Physics · Physics 2020-07-15 M. Paul Laiu , Zheng Chen , Cory D. Hauck

This work develops a nonlinear multigrid method for diffusion problems discretized by cell-centered finite volume methods on general unstructured grids. The multigrid hierarchy is constructed algebraically using aggregation of degrees of…

Numerical Analysis · Mathematics 2020-10-29 Chak Shing Lee , François Hamon , Nicola Castelletto , Panayot S. Vassilevski , Joshua White

For quantum computers to become useful tools to physicists, engineers and computational scientists, quantum algorithms for solving nonlinear differential equations need to be developed. Despite recent advances, the quest for a solver that…

Quantum Physics · Physics 2024-01-25 Felix Tennie , Luca Magri

We propose APLICUR, an adaptive preconditioning framework for large-scale linear least-squares (LLS) problems. Using a single small sketch computed once at initialization, APLICUR incrementally refines a CUR-based preconditioner throughout…

Numerical Analysis · Mathematics 2026-04-08 Jung Eun Huh , Coralia Cartis , Yuji Nakatsukasa

Pre-conditioning is a well-known concept that can significantly improve the convergence of optimization algorithms. For noise-free problems, where good pre-conditioners are not known a priori, iterative linear algebra methods offer one way…

Machine Learning · Computer Science 2019-02-21 Filip de Roos , Philipp Hennig

This paper presents a programming language which includes paradigms that are usually associated with declarative languages, such as sets, rules and search, into an imperative (functional) language. Although these paradigms are separately…

Programming Languages · Computer Science 2007-05-23 Yves Caseau , Francois-Xavier Josset , Francois Laburthe

Although design optimization has shown its great power of automatizing the whole design process and providing an optimal design, using sophisticated computational models, its process can be formidable due to a computationally expensive…

Numerical Analysis · Mathematics 2019-09-26 Youngsoo Choi , Geoffrey Oxberry , Daniel White , Trenton Kirchdoerfer

In this paper, we tackle the problem of automatically generating algorithms for linear algebra operations by taking advantage of problem-specific knowledge. In most situations, users possess much more information about the problem at hand…

Mathematical Software · Computer Science 2012-11-27 Diego Fabregat-Traver , Paolo Bientinesi

We derive nonlinear acceleration methods based on the limited memory BFGS (L-BFGS) update formula for accelerating iterative optimization methods of alternating least squares (ALS) type applied to canonical polyadic (CP) and Tucker tensor…

Numerical Analysis · Mathematics 2018-06-28 Hans De Sterck , Alexander J. M. Howse

In this work, we propose a robust and easily implemented algebraic multigrid method as a stand-alone solver or a preconditioner in Krylov subspace methods for solving either symmetric and positive definite or saddle point linear systems of…

Numerical Analysis · Mathematics 2015-03-05 Huidong Yang

Incomplete factorizations have long been popular general-purpose algebraic preconditioners for solving large sparse linear systems of equations. Guaranteeing the factorization is breakdown free while computing a high quality preconditioner…

Numerical Analysis · Mathematics 2025-02-04 Jennifer Scott , Miroslav Tůma

Cooperative constraint solving is an area of constraint programming that studies the interaction between constraint solvers with the aim of discovering the interaction patterns that amplify the positive qualities of individual solvers.…

Artificial Intelligence · Computer Science 2007-05-23 Evgueni Petrov , Eric Monfroy

Discretization of non-linear Poisson-Boltzmann Equation equations results in a system of non-linear equations with symmetric Jacobian. The Newton algorithm is the most useful tool for solving non-linear equations. It consists of solving a…

Mathematical Physics · Physics 2007-05-23 Sanjay Kumar Khattri

With the ever increasing computational power available and the development of high-performances computing, investigating the properties of realistic very large-scale nonlinear dynamical systems has been become reachable. It must be noted…

In this paper, we generalize the classical extragradient algorithm for solving variational inequality problems by utilizing nonzero normal vectors of the feasible set. In particular, conceptual algorithms are proposed with two different…

Optimization and Control · Mathematics 2019-02-25 J. Y. Bello Cruz , R. Díaz Millán , Hung M. Phan

For some typical and widely used non-convex half-quadratic regularization models and the Ambrosio-Tortorelli approximate Mumford-Shah model, based on the Kurdyka-\L ojasiewicz analysis and the recent nonconvex proximal algorithms, we…

Optimization and Control · Mathematics 2021-07-30 Shengxiang Deng , Ismail Ben Ayed , Hongpeng Sun

Although some preconditioners are available for solving dense linear systems, there are still many matrices for which preconditioners are lacking, in particular in cases where the size of the matrix $N$ becomes very large. There remains…

Numerical Analysis · Mathematics 2016-02-05 Pieter Coulier , Hadi Pouransari , Eric Darve