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Markov state models (MSMs) have been successful in computing metastable states, slow relaxation timescales and associated structural changes, and stationary or kinetic experimental observables of complex molecules from large amounts of…

Chemical Physics · Physics 2015-06-17 Frank Noe , Hao Wu , Jan-Hendrik Prinz , Nuria Plattner

The multi-level method for discrete state systems, first introduced by Anderson and Higham [Multiscale Model. Simul. 10:146--179, 2012], is a highly efficient simulation technique that can be used to elucidate statistical characteristics of…

Quantitative Methods · Quantitative Biology 2016-09-06 Christopher Lester , Ruth E. Baker , Michael B. Giles , Christian A. Yates

Mesh simplification is the process of reducing the number of vertices, edges and triangles in a three-dimensional (3D) mesh while preserving the overall shape and salient features of the mesh. A popular strategy for this is edge collapse,…

Computational Geometry · Computer Science 2025-12-24 Purva Kulkarni , Aravind Shankara Narayanan

Enhanced sampling algorithms have emerged as powerful methods to extend the utility of molecular dynamics simulations and allow the sampling of larger portions of the configuration space of complex systems in a given amount of simulation…

Statistical Mechanics · Physics 2022-12-19 Jérôme Hénin , Tony Lelièvre , Michael R. Shirts , Omar Valsson , Lucie Delemotte

Based on the assumption of the existence and uniqueness of the invariant measure for McKean-Vlasov stochastic differential equations (MV-SDEs), a self-interacting process that depends only on the current and historical information of the…

Probability · Mathematics 2024-04-09 Cui Yuanping , Li Xiaoyue

The Mixture-of-Experts (MoE) technique has proven to be a promising solution to efficiently scale the model size, which has been widely applied in recent LLM advancements. However, the substantial memory overhead of MoE models has made…

Machine Learning · Computer Science 2025-10-17 Ruijie Miao , Yilun Yao , Zihan Wang , Zhiming Wang , Bairen Yi , LingJun Liu , Yikai Zhao , Tong Yang

Multimodal Entity Alignment (MMEA) aims to identify equivalent entities across different data modalities, enabling structural data integration that in turn improves the performance of various large language model applications. To lift the…

Information Retrieval · Computer Science 2026-03-04 Yunpeng Hong , Chenyang Bu , Jie Zhang , Yi He , Di Wu , Xindong Wu

In this paper we address three aspects of nonlinear computational homogenization of elastic solids by two-scale finite element methods. First, we present a nonlinear formulation of the finite element heterogeneous multiscale method FE-HMM…

Numerical Analysis · Mathematics 2019-12-24 Bernhard Eidel , Andreas Fischer , Ajinkya Gote

We present a unified framework to tie overlapping meshes in solid mechanics applications. This framework is a combination of the X-FEM method and the mortar method, which uses Lagrange multipliers to fulfill the tying constraints. As known,…

Computational Engineering, Finance, and Science · Computer Science 2019-02-12 Basava Raju Akula , Julien Vignollet , Vladislav A. Yastrebov

We consider the problem of sparse channel estimation in massive multiple-input multiple-output systems. In this context, we propose an enhanced version of the sparse Bayesian learning (SBL) framework, referred to as enhanced SBL (E-SBL),…

Signal Processing · Electrical Eng. & Systems 2025-01-15 Arttu Arjas , Italo Atzeni

Dissipative particle dynamics is a widely used mesoscale technique for the simulation of hydrodynamics (as well as immersed particles) utilizing coarse-grained molecular dynamics. While the method is capable of describing any fluid, the…

Computational Physics · Physics 2019-10-22 Ryan C. Krafnick , Angel E. Garcia

Simulating atomic-scale processes, such as protein dynamics and catalytic reactions, is crucial for advancements in biology, chemistry, and materials science. Machine learning force fields (MLFFs) have emerged as powerful tools that achieve…

Chemical Physics · Physics 2024-12-30 Lars L. Schaaf , Ilyes Batatia , Christoph Brunken , Thomas D. Barrett , Jules Tilly

The Material Point Method (MPM) is a numerical technique that combines a fixed Eulerian background grid and Lagrangian point masses to simulate materials which undergo large deformations. Within the original MPM, discontinuous gradients of…

Numerical Analysis · Mathematics 2019-07-22 Pascal de Koster , Roel Tielen , Elizaveta Wobbes , Matthias Möller

The smoothed particle hydrodynamics (SPH) method has been increasingly used to study fluid problems in recent years; but its computational cost can be high if high resolution is required. In this study, an adaptive resolution method based…

Computational Physics · Physics 2019-01-23 Xiufeng Yang , Song-Charng Kong

We introduce a novel meshless simulation method for the McKean-Vlasov Stochastic Differential Equation (MV-SDE) utilizing deep learning, applicable to both self-interaction and interaction scenarios. Traditionally, numerical methods for…

Numerical Analysis · Mathematics 2025-01-03 Jingyuan Li , Wei Liu

Accurate day-ahead peak load forecasting is crucial not only for power dispatching but also has a great interest to investors and energy policy maker as well as government. Literature reveals that 1% error drop of forecast can reduce 10…

Machine Learning · Computer Science 2021-11-02 Yanmei Huang , Najmul Hasan , Changrui Deng , Yukun Bao

The mean field limits of systems of interacting diffusions (also called stochastic interacting particle systems (SIPS)) have been intensively studied since McKean \cite{mckean1966class}. The interacting diffusions pave a way to…

Probability · Mathematics 2021-04-06 Lukasz Szpruch , Shuren Tan , Alvin Tse

We present an implicit Split-Step explicit Euler type Method (dubbed SSM) for the simulation of McKean-Vlasov Stochastic Differential Equations (MV-SDEs) with drifts of superlinear growth in space, Lipschitz in measure and non-constant…

Numerical Analysis · Mathematics 2022-05-10 Xingyuan Chen , Goncalo dos Reis

In two previous papers (Price & Monaghan 2004a,b) (papers I,II) we have described an algorithm for solving the equations of Magnetohydrodynamics (MHD) using the Smoothed Particle Hydrodynamics (SPH) method. The algorithm uses dissipative…

Astrophysics · Physics 2009-11-13 D. J. Price , J. J. Monaghan

Squeezing currently represents the leading strategy for quantum enhanced precision measurements of a single parameter in a variety of continuous- and discrete-variable settings and technological applications. However, many important…

Quantum Physics · Physics 2020-07-31 Manuel Gessner , Augusto Smerzi , Luca Pezzè
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