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We map the conformation space of a simple lattice polymer chain to a network, where (i) the vertices of the network have a one-to-one correspondence to the conformations of the chain, and (ii) a link between two vertices indicates the…

Soft Condensed Matter · Physics 2009-10-31 A. Scala , L. A. N. Amaral , M. Barthelemy

Turing patterns, arising from the interplay between competing species of diffusive particles, has long been an important concept for describing non-equilibrium self-organization in nature, and has been extensively investigated in many…

Pattern Formation and Solitons · Physics 2023-06-26 Jasper van der Kolk , Guillermo García-Pérez , Nikos E. Kouvaris , M. Ángeles Serrano , Marián Boguñá

On a variety of tasks, the performance of neural networks predictably improves with training time, dataset size and model size across many orders of magnitude. This phenomenon is known as a neural scaling law. Of fundamental importance is…

Machine Learning · Statistics 2024-06-25 Blake Bordelon , Alexander Atanasov , Cengiz Pehlevan

Several networks occurring in real life have modular structures that are arranged in an hierarchical fashion. In this paper, we have proposed a model for such networks, using a stochastic generation method. Using this model we show that,…

Physics and Society · Physics 2009-03-12 Raj Kumar Pan , Sitabhra Sinha

Networks with underlying metric spaces attract increasing research attention in network science, statistical physics, applied mathematics, computer science, sociology, and other fields. This attention is further amplified by the current…

Physics and Society · Physics 2020-04-22 Marian Boguna , Dmitri Krioukov , Pedro Almagro , M. Angeles Serrano

The evolution of cosmic string networks is an interesting dynamical problem. The equations governing these networks are classical and fully specified, but the length scale at which cosmic string loops form has been uncertain to tens of…

Astrophysics · Physics 2009-06-23 Joseph Polchinski

Nestedness characterizes the linkage pattern of networked systems, indicating the likelihood that a node is linked to the nodes linked to the nodes with larger degrees than it. Networks of mutualistic relationship between distinct groups of…

Physics and Society · Physics 2012-03-13 Deok-Sun Lee , Seong Eun Maeng , Jae Woo Lee

Spatial networks are networks whose graph topology is constrained by their embedded spatial space. Understanding the coupled spatial-graph properties is crucial for extracting powerful representations from spatial networks. Therefore,…

Machine Learning · Computer Science 2024-01-11 Zheng Zhang , Sirui Li , Jingcheng Zhou , Junxiang Wang , Abhinav Angirekula , Allen Zhang , Liang Zhao

Accurately determining and classifying the structure of complex networks is the focus of much current research. One class of network of particular interest are metabolic pathways, which have previously been studied from a graph theoretical…

Mathematical Physics · Physics 2012-10-10 Henry Dorrian , Kieran Smallbone , Jon borresen

The topology of the network of load transmitting connections plays an essential role in the cascading failure dynamics of complex systems driven by the redistribution of load after local breakdown events. In particular, as the network…

Disordered Systems and Neural Networks · Physics 2023-11-21 G. Pál , Zs. Danku , A. Batool , V. Kádár , N. Yoshioka , N. Ito , G. Ódor , F. Kun

There are many networks in real life which exist as form of Scale-free networks such as World Wide Web, protein-protein interaction network, semantic networks, airline networks, interbank payment networks, etc. If we want to analyze these…

Social and Information Networks · Computer Science 2026-03-23 Rakib Hassan Pran

Most real-world networks are embedded in latent geometries. If a node in a network is found in the vicinity of another node in the latent geometry, the two nodes have a disproportionately high probability of being connected by a link. The…

Physics and Society · Physics 2024-06-19 Bukyoung Jhun

Disentangling the mechanisms underlying the social network evolution is one of social science's unsolved puzzles. Preferential attachment is a powerful mechanism explaining social network dynamics, yet not able to explain all scaling-laws…

Social and Information Networks · Computer Science 2014-09-19 Yang Yang , Yuxiao Dong , Nitesh V. Chawla

Small-world networks are the focus of recent interest because they appear to circumvent many of the limitations of either random networks or regular lattices as frameworks for the study of interaction networks of complex systems. Here, we…

Statistical Mechanics · Physics 2012-03-08 Luis A. Nunes Amaral , Antonio Scala , Marc Barthelemy , H. Eugene Stanley

Data-driven analysis of complex networks has been in the focus of research for decades. An important area of research is to study how well real networks can be described with a small selection of metrics, furthermore how well network models…

Social and Information Networks · Computer Science 2022-04-28 Marcell Nagy , Roland Molontay

We analyse growing networks ranging from collaboration graphs of scientists to the network of similarities defined among the various transcriptional profiles of living cells. For the explicit demonstration of the scale-free nature and…

Statistical Mechanics · Physics 2009-11-10 I. Farkas , I. Derenyi , H. Jeong , Z. Neda , Z. N. Oltvai , E. Ravasz , A. Schubert , A. -L. Barabasi , T. Vicsek

Random networks with complex topology are common in Nature, describing systems as diverse as the world wide web or social and business networks. Recently, it has been demonstrated that most large networks for which topological information…

Disordered Systems and Neural Networks · Physics 2016-08-31 Albert-Laszlo Barabasi , Reka Albert , Hawoong Jeong

We study the evolution of a random graph under the constraint that the diameter remain constant as the graph grows. We show that if the graph maintains the form of its link distribution it must be scale-free with exponent between 2 and 3.…

Statistical Mechanics · Physics 2007-05-23 Amit Puniyani , Rajan Lukose

The area of networks is very interdisciplinary and exhibits many applications in several fields of science. Nevertheless, there are few studies focusing on geographically located $d$-dimensional networks. In this paper, we study scaling…

Statistical Mechanics · Physics 2019-01-09 Samuraí Brito , Thiago C. Nunes , Luciano R. da Silva , Constantino Tsallis

A method for embedding graphs in Euclidean space is suggested. The method connects nodes to their geographically closest neighbors and economizes on the total physical length of links. The topological and geometrical properties of…

Condensed Matter · Physics 2007-05-23 Daniel ben-Avraham , Alejandro F. Rozenfeld , Reuven Cohen , Shlomo Havlin
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