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Persistent homology (PH) is a rigorous mathematical theory that provides a robust descriptor of data in the form of persistence diagrams (PDs) which are 2D multisets of points. Their variable size makes them, however, difficult to combine…

Machine Learning · Statistics 2019-06-14 Bartosz Zielinski , Michal Lipinski , Mateusz Juda , Matthias Zeppelzauer , Pawel Dlotko

We study the grokking phenomenon through the lens of topology. Using persistent homology on point clouds derived from the embedding matrices of a range of models trained on modular arithmetic with varying primes, we identify a clear and…

Machine Learning · Computer Science 2026-05-08 Yifan Tang , Qiquan Wang , Inés García-Redondo , Anthea Monod

This paper presents a new clustering algorithm for space-time data based on the concepts of topological data analysis and in particular, persistent homology. Employing persistent homology - a flexible mathematical tool from algebraic…

Machine Learning · Statistics 2019-10-28 Umar Islambekov , Yulia Gel

Within the context of topological data analysis, the problems of identifying topological significance and matching signals across datasets are important and useful inferential tasks in many applications. The limitation of existing solutions…

Algebraic Topology · Mathematics 2024-06-26 Inés García-Redondo , Anthea Monod , Anna Song

This thesis addresses the theory of topological spaces and the foundations of persistence theory. We will discuss chain complexes and the associated simplicial homology groups, as well as their relationship with singular homology theory.…

Algebraic Topology · Mathematics 2024-10-14 Luciano Melodia

Persistent homology is a powerful tool for characterizing the topology of a data set at various geometric scales. When applied to the description of molecular structures, persistent homology can capture the multiscale geometric features and…

Quantitative Methods · Quantitative Biology 2018-07-31 Zixuan Cang , Guo-Wei Wei

We introduce a new feature map for barcodes that arise in persistent homology computation. The main idea is to first realize each barcode as a path in a convenient vector space, and to then compute its path signature which takes values in…

Machine Learning · Statistics 2020-10-28 Ilya Chevyrev , Vidit Nanda , Harald Oberhauser

In many applications concerning the comparison of data expressed by $\mathbb{R}^m$-valued functions defined on a topological space $X$, the invariance with respect to a given group $G$ of self-homeomorphisms of $X$ is required. While…

Algebraic Topology · Mathematics 2016-01-29 Patrizio Frosini , Grzegorz Jablonski

We present a parallelizable algorithm for computing the persistent homology of a filtered chain complex. Our approach differs from the commonly used reduction algorithm by first computing persistence pairs within local chunks, then…

Algebraic Topology · Mathematics 2013-03-05 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We define persistent homology groups over any set of spaces which have inclusions defined so that the corresponding directed graph between the spaces is acyclic, as well as along any subgraph of this directed graph. This method…

Computational Geometry · Computer Science 2019-06-20 Erin Wolf Chambers , David Letscher

Topology applied to real world data using persistent homology has started to find applications within machine learning, including deep learning. We present a differentiable topology layer that computes persistent homology based on level set…

Persistence homology is a tool used to measure topological features that are present in data sets and functions. Persistence pairs births and deaths of these features as we iterate through the sublevel sets of the data or function of…

Computational Geometry · Computer Science 2010-02-10 Brittany Terese Fasy

Persistent homology is a widely-used tool in topological data analysis (TDA) for understanding the underlying shape of complex data. By constructing a filtration of simplicial complexes from data points, it captures topological features…

Algebraic Topology · Mathematics 2025-10-23 Aleksei Luchinsky , Umar Islambekov

Persistent Homology is a widely used topological data analysis tool that creates a concise description of the topological properties of a point cloud based on a specified filtration. Most filtrations used for persistent homology depend…

Algebraic Topology · Mathematics 2024-06-05 Vincent P. Grande , Michael T. Schaub

Multidimensional persistence studies topological features of shapes by analyzing the lower level sets of vector-valued functions. The rank invariant completely determines the multidimensional analogue of persistent homology groups. We prove…

Algebraic Topology · Mathematics 2009-08-04 Andrea Cerri , Barbara Di Fabio , Massimo Ferri , Patrizio Frosini , Claudia Landi

Topological data analysis (TDA) has emerged as an effective approach in data science, with its key technique, persistent homology, rooted in algebraic topology. Although alternative approaches based on differential topology, geometric…

Algebraic Topology · Mathematics 2025-04-01 Faisal Suwayyid , Guo-Wei Wei

This paper aims to introduce a filtration analysis of sampled maps based on persistent homology, providing a new method for reconstructing the underlying maps. The key idea is to extend the definition of homology induced maps of…

Algebraic Topology · Mathematics 2019-12-19 Hiroshi Takeuchi

We introduce and investigate notions of persistent homology for p-groups and for coclass trees of p-groups. Using computer techniques we show that persistent homology provides fairly strong homological invariants for p-groups of order at…

Group Theory · Mathematics 2012-10-25 Graham Ellis , Simon A. King

Persistent homology is a popular method for computing topological features of (metric) data. Standard approaches based on the \v{C}ech or Rips filtration are stable under small perturbations of the data, but highly sensitive to outliers.…

Algebraic Topology · Mathematics 2026-02-27 Pepijn Roos Hoefgeest , Lucas Slot

Persistent homology provides a new approach for the topological simplification of big data via measuring the life time of intrinsic topological features in a filtration process and has found its success in scientific and engineering…

Biomolecules · Quantitative Biology 2014-12-09 Bao Wang , Guo-Wei Wei