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We propose NEURONA, a neuro-symbolic framework for fMRI decoding and concept grounding in neural activity. Leveraging image- and video-based fMRI question-answering datasets, NEURONA learns to decode interacting concepts from visual stimuli…

Neurons and Cognition · Quantitative Biology 2026-03-05 Yanchen Wang , Joy Hsu , Ehsan Adeli , Jiajun Wu

Functional data clustering is concerned with grouping functions that share similar structure, yet most existing methods implicitly operate on sampled grids, causing cluster assignments to depend on resolution, sampling density, or…

Machine Learning · Computer Science 2026-02-27 Anirudh Thatipelli , Ali Siahkoohi

Deciphering visual content from functional Magnetic Resonance Imaging (fMRI) helps illuminate the human vision system. However, the scarcity of fMRI data and noise hamper brain decoding model performance. Previous approaches primarily…

Computer Vision and Pattern Recognition · Computer Science 2024-06-14 Yulong Liu , Yongqiang Ma , Guibo Zhu , Haodong Jing , Nanning Zheng

In this paper, we focus on how to locate the relevant or discriminative brain regions related with external stimulus or certain mental decease, which is also called support identification, based on the neuroimaging data. The main difficulty…

Computer Vision and Pattern Recognition · Computer Science 2015-06-09 Yilun Wang , Sheng Zhang , Junjie Zheng , Heng Chen , Huafu Chen

Sparse coding networks, which utilize unsupervised learning to maximize coding efficiency, have successfully reproduced response properties found in primary visual cortex \cite{AN:OlshausenField96}. However, conventional sparse coding…

Neurons and Cognition · Quantitative Biology 2011-05-25 William K. Coulter , Christopher J. Hillar , Friedrich T. Sommer

Spatial Independent Component Analysis (ICA) is an increasingly used data-driven method to analyze functional Magnetic Resonance Imaging (fMRI) data. To date, it has been used to extract meaningful patterns without prior information.…

Computer Vision and Pattern Recognition · Computer Science 2009-11-25 Gaël Varoquaux , Sepideh Sadaghiani , Jean Baptiste Poline , Bertrand Thirion

Brain network analysis is a useful approach to studying human brain disorders because it can distinguish patients from healthy people by detecting abnormal connections. Due to the complementary information from multiple modal neuroimages,…

Image and Video Processing · Electrical Eng. & Systems 2023-08-22 Qiankun Zuo , Yanfei Zhu , Libin Lu , Zhi Yang , Yuhui Li , Ning Zhang

Visual image reconstruction from functional Magnetic Resonance Imaging (fMRI) is a fundamental task in brain decoding, providing a crucial pathway for understanding human perceptual mechanisms and developing advanced brain-computer…

Computer Vision and Pattern Recognition · Computer Science 2026-05-20 Yudan Ren , Pengcheng Shi , Zihan Ma , Xiaowei He , Xiao Li

Recent advances in neuroimaging analysis have enabled accurate decoding of mental state from brain activation patterns during functional magnetic resonance imaging scans. A commonly applied tool for this purpose is principal components…

Machine Learning · Statistics 2025-09-10 Jared Rieck , Julia Wrobel , Joshua L. Gowin , Yue Wang , Martin Paulus , Ryan Peterson

Multimodal functional neuroimaging enables systematic analysis of brain mechanisms and provides discriminative representations for brain-computer interface (BCI) decoding. However, its acquisition is constrained by high costs and…

Computer Vision and Pattern Recognition · Computer Science 2025-06-04 Weiheng Yao , Xuhang Chen , Shuqiang Wang

Decoding brain signals accurately and efficiently is crucial for intra-cortical brain-computer interfaces. Traditional decoding approaches based on neural activity vector features suffer from low accuracy, whereas deep learning based…

Human-Computer Interaction · Computer Science 2025-04-15 Song Yang , Haotian Fu , Herui Zhang , Peng Zhang , Wei Li , Dongrui Wu

Functional connectivity (FC) derived from resting-state fMRI plays a critical role in personalized predictions such as age and cognitive performance. However, applying foundation models(FM) to fMRI data remains challenging due to its high…

Neurons and Cognition · Quantitative Biology 2025-08-26 Yanwen Wang , Xinglin Zhao , Yijin Song , Xiaobo Liu , Yanrong Hao , Rui Cao , Xin Wen

Brain-computer interface (BCI) decodes brain signals to understand user intention and status. Because of its simple and safe data acquisition process, electroencephalogram (EEG) is commonly used in non-invasive BCI. One of EEG paradigms,…

Human-Computer Interaction · Computer Science 2020-02-05 Byeong-Hoo Lee , Ji-Hoon Jeong , Kyung-Hwan Shim , Dong-Joo Kim

Predicting behavioral variables from neuroimaging modalities such as magnetic resonance imaging (MRI) has the potential to allow the development of neuroimaging biomarkers of mental and neurological disorders. A crucial processing step to…

Neurons and Cognition · Quantitative Biology 2025-07-29 Mikkel Schöttner Sieler , Thomas A. W. Bolton , Jagruti Patel , Patric Hagmann

Nonnegative matrix factorization (NMF) with group sparsity constraints is formulated as a probabilistic graphical model and, assuming some observed data have been generated by the model, a feasible variational Bayesian algorithm is derived…

Computer Vision and Pattern Recognition · Computer Science 2014-05-28 Ivan Ivek

The study of hierarchy in networks of the human brain has been of significant interest among the researchers as numerous studies have pointed out towards a functional hierarchical organization of the human brain. This paper provides a novel…

Neurons and Cognition · Quantitative Biology 2021-03-02 Dushyant Sahoo , Theodore D. Satterthwaite , Christos Davatzikos

Reconstructing visual stimuli from human brain activity (e.g., fMRI) bridges neuroscience and computer vision by decoding neural representations. However, existing methods often overlook critical brain structure-function relationships,…

Computer Vision and Pattern Recognition · Computer Science 2025-07-23 Sijin Yu , Zijiao Chen , Wenxuan Wu , Shengxian Chen , Zhongliang Liu , Jingxin Nie , Xiaofen Xing , Xiangmin Xu , Xin Zhang

Multichannel convolutive blind speech source separation refers to the problem of separating different speech sources from the observed multichannel mixtures without much a priori information about the mixing system. Multichannel nonnegative…

Sound · Computer Science 2024-01-04 Jianyu Wang , Shanzheng Guan

Network analysis is rapidly becoming a standard tool for studying functional magnetic resonance imaging (fMRI) data. In this framework, different brain areas are mapped to the nodes of a network, whose links depict functional dependencies…

Neurons and Cognition · Quantitative Biology 2017-05-30 Rainer Kujala , Enrico Glerean , Raj Kumar Pan , Iiro P. Jääskeläinen , Mikko Sams , Jari Saramäki

Spatial Independent Component Analysis (ICA) decomposes the time by space functional MRI (fMRI) matrix into a set of 1-D basis time courses and their associated 3-D spatial maps that are optimized for mutual independence. When applied to…

Applications · Statistics 2015-05-30 Gautam V. Pendse , David Borsook , Lino Becerra
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