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Related papers: Learning for Biomedical Information Extraction: Me…

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Ever-expanding volumes of biomedical text require automated semantic annotation techniques to curate and put to best use. An established field of research seeks to link mentions in text to knowledge bases such as those included in the UMLS…

Artificial Intelligence · Computer Science 2018-11-13 Genevieve Gorrell , Xingyi Song , Angus Roberts

We propose an approach for biomedical information extraction that marries the advantages of machine learning models, e.g., learning directly from data, with the benefits of rule-based approaches, e.g., interpretability. Our approach starts…

Computation and Language · Computer Science 2016-07-01 Marco A. Valenzuela-Escarcega , Gus Hahn-Powell , Dane Bell , Mihai Surdeanu

This paper aims at identifying emerging computational intelligence trends for the design and modeling of complex biometric-enabled infrastructure and systems. Biometric-enabled systems are evolving towards deep learning and deep inference…

Computer Vision and Pattern Recognition · Computer Science 2020-06-23 Svetlana Yanushkevich , Shawn Eastwood , Kenneth Lai , Vlad Shmerko

The difficulty of the information extraction task lies in dealing with the task-specific label schemas and heterogeneous data structures. Recent work has proposed methods based on large language models to uniformly model different…

Computation and Language · Computer Science 2024-04-03 Xinglin Xiao , Yijie Wang , Nan Xu , Yuqi Wang , Hanxuan Yang , Minzheng Wang , Yin Luo , Lei Wang , Wenji Mao , Daniel Zeng

The best evidence concerning comparative treatment effectiveness comes from clinical trials, the results of which are reported in unstructured articles. Medical experts must manually extract information from articles to inform…

Computation and Language · Computer Science 2022-01-11 Benjamin E. Nye , Jay DeYoung , Eric Lehman , Ani Nenkova , Iain J. Marshall , Byron C. Wallace

To reduce the large amount of time spent screening, identifying, and recruiting patients into clinical trials, we need prescreening systems that are able to automate the data extraction and decision-making tasks that are typically relegated…

Computation and Language · Computer Science 2016-09-07 Abhishek Kalyan Adupa , Ravi Prakash Garg , Jessica Corona-Cox , Sanjiv. J. Shah , Siddhartha R. Jonnalagadda

Deep learning has achieved significant breakthroughs in medical imaging, but these advancements are often dependent on large, well-annotated datasets. However, obtaining such datasets poses a significant challenge, as it requires…

Computer Vision and Pattern Recognition · Computer Science 2025-04-17 Siteng Ma , Honghui Du , Yu An , Jing Wang , Qinqin Wang , Haochang Wu , Aonghus Lawlor , Ruihai Dong

Recently, deep learning approaches have become the main research frontier for biological image reconstruction and enhancement problems thanks to their high performance, along with their ultra-fast inference times. However, due to the…

Image and Video Processing · Electrical Eng. & Systems 2022-03-18 Mehmet Akçakaya , Burhaneddin Yaman , Hyungjin Chung , Jong Chul Ye

Open Information Extraction (OIE) is a field of natural language processing that aims to present textual information in a format that allows it to be organized, analyzed and reflected upon. Numerous OIE systems are developed, claiming…

Computation and Language · Computer Science 2024-07-25 Fabrice Lamarche , Philippe Langlais

Microscopy image enhancement plays a pivotal role in understanding the details of biological cells and materials at microscopic scales. In recent years, there has been a significant rise in the advancement of microscopy image enhancement,…

Image and Video Processing · Electrical Eng. & Systems 2025-09-29 Debasish Dutta , Neeharika Sonowal , Risheraj Barauh , Deepjyoti Chetia , Sanjib Kr Kalita

The vast amount of biological knowledge accumulated over the years has allowed researchers to identify various biochemical interactions and define different families of pathways. There is an increased interest in identifying pathways and…

Applications · Statistics 2011-11-24 Francesco C. Stingo , Yian A. Chen , Mahlet G. Tadesse , Marina Vannucci

Artificial Intelligence has emerged as a useful aid in numerous clinical applications for diagnosis and treatment decisions. Deep neural networks have shown same or better performance than clinicians in many tasks owing to the rapid…

Image and Video Processing · Electrical Eng. & Systems 2021-11-05 Zohaib Salahuddin , Henry C Woodruff , Avishek Chatterjee , Philippe Lambin

Healthcare sector is totally different from other industry. It is on high priority sector and people expect highest level of care and services regardless of cost. It did not achieve social expectation even though it consume huge percentage…

Computer Vision and Pattern Recognition · Computer Science 2017-04-25 Muhammad Imran Razzak , Saeeda Naz , Ahmad Zaib

The growing demand for sustainable development brings a series of information technologies to help agriculture production. Especially, the emergence of machine learning applications, a branch of artificial intelligence, has shown multiple…

Computer Vision and Pattern Recognition · Computer Science 2023-10-20 Jianping Yao , Son N. Tran , Samantha Sawyer , Saurabh Garg

Neural network representation learning frameworks have recently shown to be highly effective at a wide range of tasks ranging from radiography interpretation via data-driven diagnostics to clinical decision support. This often superior…

Information Retrieval · Computer Science 2018-11-14 Xing Wei , Carsten Eickhoff

Deep learning has shown its human-level performance in various applications. However, current deep learning models are characterised by catastrophic forgetting of old knowledge when learning new classes. This poses a challenge particularly…

Machine Learning · Computer Science 2022-04-29 Yang Yang , Zhiying Cui , Junjie Xu , Changhong Zhong , Wei-Shi Zheng , Ruixuan Wang

Human-like large language models (LLMs), especially the most powerful and popular ones in OpenAI's GPT family, have proven to be very helpful for many natural language processing (NLP) related tasks. Therefore, various attempts have been…

Computation and Language · Computer Science 2024-09-11 Ridong Han , Chaohao Yang , Tao Peng , Prayag Tiwari , Xiang Wan , Lu Liu , Benyou Wang

Human-like large language models (LLMs), especially the most powerful and popular ones in OpenAI's GPT family, have proven to be very helpful for many natural language processing (NLP) related tasks. Therefore, various attempts have been…

Computation and Language · Computer Science 2024-09-12 Ridong Han , Chaohao Yang , Tao Peng , Prayag Tiwari , Xiang Wan , Lu Liu , Benyou Wang

Artificial intelligence (AI) is a fast-growing field focused on modeling and machine implementation of various cognitive functions with an increasing number of applications in computer vision, text processing, robotics, neurotechnology,…

Neurons and Cognition · Quantitative Biology 2022-07-28 Julia Berezutskaya , Anne-Lise Saive , Karim Jerbi , Marcel van Gerven

Temporal information extraction (IE) aims to extract structured temporal information from unstructured text, thereby uncovering the implicit timelines within. This technique is applied across domains such as healthcare, newswire, and…

Computation and Language · Computer Science 2025-04-11 Xin Su , Phillip Howard , Steven Bethard