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How large ecosystems can create and maintain the remarkable biodiversity we see in nature is probably one of the biggest open questions in science, attracting attention from different fields, from Theoretical Ecology to Mathematics and…

Populations and Evolution · Quantitative Biology 2023-01-03 Violeta Calleja-Solanas , Nagi Khalil , Jesús Gómez-Gardeñes , Emilio Hernández-García , Sandro Meloni

We propose a growing network model that consists of two tunable mechanisms: growth by merging modules which are represented as complete graphs and a fitness-driven preferential attachment. Our model exhibits the three prominent statistical…

Molecular Networks · Quantitative Biology 2007-07-31 Kazuhiro Takemoto , Chikoo Oosawa

Systems as diverse as genetic networks or the world wide web are best described as networks with complex topology. A common property of many large networks is that the vertex connectivities follow a scale-free power-law distribution. This…

Disordered Systems and Neural Networks · Physics 2015-06-25 Albert-Laszlo Barabasi , Reka Albert

We propose a novel network growth model coupled with the competition interaction to simulate macroevolution. Our work shows that the competition plays an important role in macroevolution and it is more rational to describe the interaction…

Populations and Evolution · Quantitative Biology 2007-07-11 Shao-Meng Qin , Yong Chen , Pan Zhang

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

Biological Physics · Physics 2015-05-13 Sitabhra Sinha

We study numerically domain growth and interface fluctuations in one- and two-dimensional lattice systems composed of four species that interact in a cyclic way. Particle mobility is implemented through exchanges of particles located on…

Statistical Mechanics · Physics 2015-06-05 Ahmed Roman , David Konrad , Michel Pleimling

We study possible applications of artificial neural networks to examine the string landscape. Since the field of application is rather versatile, we propose to dynamically evolve these networks via genetic algorithms. This means that we…

High Energy Physics - Theory · Physics 2017-09-13 Fabian Ruehle

Network properties govern the rate and extent of various spreading processes, from simple contagions to complex cascades. Recently, the analysis of spreading processes has been extended from static networks to temporal networks, where nodes…

Physics and Society · Physics 2019-12-18 Eun Lee , Scott Emmons , Ryan Gibson , James Moody , Peter J. Mucha

Inspired by language competition processes, we present a model of coupled evolution of node and link states. In particular, we focus on the interplay between the use of a language and the preference or attitude of the speakers towards it,…

Physics and Society · Physics 2016-12-05 Adrián Carro , Raúl Toral , Maxi San Miguel

The architecture of bipartite networks linking two classes of constituents is affected by the interactions within each class. For the bipartite networks representing the mutualistic relationship between pollinating animals and plants, it…

Populations and Evolution · Quantitative Biology 2012-03-13 Seong Eun Maeng , Jae Woo Lee , Deok-Sun Lee

Many real world networks, such as social networks, are primarily formed through local interactions between agents. Additionally, in contrast with common network models, social and biological networks exhibit a high degree of clustering.…

Physics and Society · Physics 2015-03-10 Navid Dianati , Nima Dehmamy

Several networks occurring in real life have modular structures that are arranged in an hierarchical fashion. In this paper, we have proposed a model for such networks, using a stochastic generation method. Using this model we show that,…

Physics and Society · Physics 2009-03-12 Raj Kumar Pan , Sitabhra Sinha

We consider a dynamic social network model in which agents play repeated games in pairings determined by a stochastically evolving social network. Individual agents begin to interact at random, with the interactions modeled as games. The…

Probability · Mathematics 2007-05-23 Brian Skyrms , Robin Pemantle

We analyse the stability of linear dynamical systems defined on sparse, random graphs with predator-prey, competitive, and mutualistic interactions. These systems are aimed at modelling the stability of fixed points in large systems defined…

Statistical Mechanics · Physics 2025-01-30 Andrea Marcello Mambuca , Chiara Cammarota , Izaak Neri

This paper introduces how human languages can be studied in light of recent development of network theories. There are two directions of exploration. One is to study networks existing in the language system. Various lexical networks can be…

Computation and Language · Computer Science 2007-05-23 Jinyun KE

We consider a heteroclinic network in the framework of winnerless competition of species. It consists of two levels of heteroclinic cycles. On the lower level, the heteroclinic cycle connects three saddles, each representing the survival of…

Adaptation and Self-Organizing Systems · Physics 2018-12-26 Maximilian Voit , Hildegard Meyer-Ortmanns

It has been observed that mutualistic bipartite networks have a nested structure of interactions. In addition, the degree distributions associated with the two guilds involved in such networks (e.g. plants & pollinators or plants & seed…

Populations and Evolution · Quantitative Biology 2007-09-20 Diego Medan , Roberto P. J. Perazzo , Mariano Devoto , Enrique Burgos , Martin G. Zimmermann , Horacio Ceva , Ana M. Delbue

If one isolated species (corporation) is supposed to evolve following the logistic mapping, then we are tempted to think that the dynamics of two species (corporations) can be expressed by a coupled system of two discrete logistic…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Ricardo Lopez-Ruiz , Daniele Fournier-Prunaret

We investigate in detail a recent model of colliding mobile agents [Phys. Rev. Lett.~96, 088702], used as an alternative approach to construct evolving networks of interactions formed by the collisions governed by suitable dynamical rules.…

Physics and Society · Physics 2013-01-01 Marta C. González , Pedro G. Lind , Hans J. Herrmann

Many biological, ecological and economic systems are best described by weighted networks, as the nodes interact with each other with varying strength. However, most network models studied so far are binary, the link strength being either 0…

Disordered Systems and Neural Networks · Physics 2009-11-07 S. H. Yook , H. Jeong , A. -L. Barabasi , Y. Tu