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Accurate and automatic organ segmentation from 3D radiological scans is an important yet challenging problem for medical image analysis. Specifically, the pancreas demonstrates very high inter-patient anatomical variability in both its…

Computer Vision and Pattern Recognition · Computer Science 2017-02-02 Holger R. Roth , Le Lu , Nathan Lay , Adam P. Harrison , Amal Farag , Andrew Sohn , Ronald M. Summers

Organ segmentation is a prerequisite for a computer-aided diagnosis (CAD) system to detect pathologies and perform quantitative analysis. For anatomically high-variability abdominal organs such as the pancreas, previous segmentation works…

Computer Vision and Pattern Recognition · Computer Science 2014-08-01 Amal Farag , Le Lu , Evrim Turkbey , Jiamin Liu , Ronald M. Summers

Automatic organ segmentation is an important yet challenging problem for medical image analysis. The pancreas is an abdominal organ with very high anatomical variability. This inhibits previous segmentation methods from achieving high…

Computer Vision and Pattern Recognition · Computer Science 2015-06-23 Holger R. Roth , Le Lu , Amal Farag , Hoo-Chang Shin , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

Deep neural networks have been widely adopted for automatic organ segmentation from abdominal CT scans. However, the segmentation accuracy of some small organs (e.g., the pancreas) is sometimes below satisfaction, arguably because deep…

Computer Vision and Pattern Recognition · Computer Science 2017-06-22 Yuyin Zhou , Lingxi Xie , Wei Shen , Yan Wang , Elliot K. Fishman , Alan L. Yuille

Automatic organ segmentation is an important prerequisite for many computer-aided diagnosis systems. The high anatomical variability of organs in the abdomen, such as the pancreas, prevents many segmentation methods from achieving high…

Computer Vision and Pattern Recognition · Computer Science 2015-09-17 Holger R. Roth , Amal Farag , Le Lu , Evrim B. Turkbey , Ronald M. Summers

Due to the fact that pancreas is an abdominal organ with very large variations in shape and size, automatic and accurate pancreas segmentation can be challenging for medical image analysis. In this work, we proposed a fully automated two…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Ningning Zhao , Nuo Tong , Dan Ruan , Ke Sheng

Robust automated organ segmentation is a prerequisite for computer-aided diagnosis (CAD), quantitative imaging analysis and surgical assistance. For high-variability organs such as the pancreas, previous approaches report undesirably low…

Computer Vision and Pattern Recognition · Computer Science 2016-03-08 Amal Farag , Le Lu , Holger R. Roth , Jiamin Liu , Evrim Turkbey , Ronald M. Summers

We propose a novel 3D fully convolutional deep network for automated pancreas segmentation from both MRI and CT scans. More specifically, the proposed model consists of a 3D encoder that learns to extract volume features at different…

Image and Video Processing · Electrical Eng. & Systems 2022-06-29 Federica Proietto Salanitri , Giovanni Bellitto , Ismail Irmakci , Simone Palazzo , Ulas Bagci , Concetto Spampinato

Automated volumetric segmentation of the pancreas on cross-sectional imaging is needed for diagnosis and follow-up of pancreatic diseases. While CT-based pancreatic segmentation is more established, MRI-based segmentation methods are…

Recently, numerous pancreas segmentation methods have achieved promising performance on local single-source datasets. However, these methods don't adequately account for generalizability issues, and hence typically show limited performance…

Computer Vision and Pattern Recognition · Computer Science 2025-05-13 Jun Li , Hongzhang Zhu , Tao Chen , Xiaohua Qian

Deep learning has shown great promise in the ability to automatically annotate organs in magnetic resonance imaging (MRI) scans, for example, of the brain. However, despite advancements in the field, the ability to accurately segment…

Image and Video Processing · Electrical Eng. & Systems 2024-03-26 Cosmin Ciausu , Deepa Krishnaswamy , Benjamin Billot , Steve Pieper , Ron Kikinis , Andrey Fedorov

Pancreas segmentation has been traditionally challenging due to its small size in computed tomography abdominal volumes, high variability of shape and positions among patients, and blurred boundaries due to low contrast between the pancreas…

Image and Video Processing · Electrical Eng. & Systems 2025-05-22 Andrea Moglia , Matteo Cavicchioli , Luca Mainardi , Pietro Cerveri

The performance of deep learning-based methods strongly relies on the number of datasets used for training. Many efforts have been made to increase the data in the medical image analysis field. However, unlike photography images, it is hard…

Image and Video Processing · Electrical Eng. & Systems 2020-09-29 Pochuan Wang , Chen Shen , Holger R. Roth , Dong Yang , Daguang Xu , Masahiro Oda , Kazunari Misawa , Po-Ting Chen , Kao-Lang Liu , Wei-Chih Liao , Weichung Wang , Kensaku Mori

Accurate and robust abdominal multi-organ segmentation from CT imaging of different modalities is a challenging task due to complex inter- and intra-organ shape and appearance variations among abdominal organs. In this paper, we propose a…

Image and Video Processing · Electrical Eng. & Systems 2022-08-03 Minfeng Xu , Heng Guo , Jianfeng Zhang , Ke Yan , Le Lu

This paper presents a fully automated atlas-based pancreas segmentation method from CT volumes utilizing 3D fully convolutional network (FCN) feature-based pancreas localization. Segmentation of the pancreas is difficult because it has…

Computer Vision and Pattern Recognition · Computer Science 2018-06-11 Masahiro Oda , Natsuki Shimizu , Holger R. Roth , Ken'ichi Karasawa , Takayuki Kitasaka , Kazunari Misawa , Michitaka Fujiwara , Daniel Rueckert , Kensaku Mori

This paper proposes a fully automated atlas-based pancreas segmentation method from CT volumes utilizing atlas localization by regression forest and atlas generation using blood vessel information. Previous probabilistic atlas-based…

Computer Vision and Pattern Recognition · Computer Science 2020-05-08 Masahiro Oda , Natsuki Shimizu , Ken'ichi Karasawa , Yukitaka Nimura , Takayuki Kitasaka , Kazunari Misawa , Michitaka Fujiwara , Daniel Rueckert , Kensaku Mori

In clinical practice, regions of interest in medical imaging often need to be identified through a process of precise image segmentation. The quality of this image segmentation step critically affects the subsequent clinical assessment of…

Image and Video Processing · Electrical Eng. & Systems 2021-03-23 João B. S. Carvalho , João A. Santinha , Đorđe Miladinović , Joachim M. Buhmann

Automatic pancreas segmentation in radiology images, eg., computed tomography (CT) and magnetic resonance imaging (MRI), is frequently required by computer-aided screening, diagnosis, and quantitative assessment. Yet pancreas is a…

Computer Vision and Pattern Recognition · Computer Science 2018-04-02 Jinzheng Cai , Le Lu , Fuyong Xing , Lin Yang

An accurate segmentation of the pancreas on CT is crucial to identify pancreatic pathologies and extract imaging-based biomarkers. However, prior research on pancreas segmentation has primarily focused on modifying the segmentation model…

Image and Video Processing · Electrical Eng. & Systems 2025-04-10 Anisa V. Prasad , Tejas Sudharshan Mathai , Pritam Mukherjee , Jianfei Liu , Ronald M. Summers

We aim at segmenting small organs (e.g., the pancreas) from abdominal CT scans. As the target often occupies a relatively small region in the input image, deep neural networks can be easily confused by the complex and variable background.…

Computer Vision and Pattern Recognition · Computer Science 2018-04-10 Qihang Yu , Lingxi Xie , Yan Wang , Yuyin Zhou , Elliot K. Fishman , Alan L. Yuille
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