English
Related papers

Related papers: Global Properties of Nested Network Model with App…

200 papers

Cytotoxic T-lymphocytes (CTLs) recognize viral protein fragments displayed by major histocompatibility complex (MHC) molecules on the surface of virally infected cells and generate an anti-viral response that can kill the infected cells.…

Populations and Evolution · Quantitative Biology 2014-03-25 Taylor A. Kessinger , Alan S. Perelson , Richard A. Neher

This contribution is devoted to a new model of HIV multiplication motivated by the patent of one of the authors. We take into account the antigenic diversity through what we define "antigenicity", whether of the virus or of the adapted…

Numerical Analysis · Mathematics 2011-02-02 François Dubois , Hervé Le Meur , Claude Reiss

One way in which the human immunodeficiency virus (HIV-1) replicates within a host is by infecting activated CD4+ T-cells, which then produce additional copies of the virus. Even with the introduction of antiretroviral drug therapy, which…

Dynamical Systems · Mathematics 2016-04-18 Stephen Pankavich

Population dynamics and evolutionary genetics underly the structure of ecosystems, changing on the same timescale for interacting species with rapid turnover, such as virus (e.g. HIV) and immune response. Thus, an important problem in…

Populations and Evolution · Quantitative Biology 2021-06-17 Cameron J. Browne , Fadoua Yahia

We have developed a mathematical model for in-host virus dynamics that includes spatial chemotaxis and diffusion across a two dimensional surface representing the vaginal or rectal epithelium at primary HIV infection. A linear stability…

Quantitative Methods · Quantitative Biology 2016-03-07 Ognjen Stancevic , Christopher Angstmann , John M. Murray , Bruce I. Henry

This study presents an improved mathematical model for Hepatitis B Virus (HBV) transmission dynamics by investigating autonomous and nonautonomous cases. The novel model incorporates the effects of medical treatment, allowing for a more…

Dynamical Systems · Mathematics 2025-05-15 Abdallah Alsammani

We establish a stochastic HIV/AIDS model for the individuals with protection awareness and reveal how the protection awareness plays its important role in the control of AIDS. We firstly show that there exists a global positive solution for…

Dynamical Systems · Mathematics 2023-03-01 Xuanpei Zhai , Wenshuang Li , Fengying Wei , Xuerong Mao

The search to understand how the HIV virus spreads inside the human body and how the immune response works to control it has motivated studies related to Mathematical Immunology. Actually, researches include the idea of mathematical models…

Populations and Evolution · Quantitative Biology 2016-01-19 Marcelo Margon Rossi , Luis Fernandez Lopez

Motivated by observations in sequence data of herpesviruses, we introduce a multi-locus model for the joint evolution of different genotypes in a virus population that is distributed across a population of hosts. In the model, virus…

Populations and Evolution · Quantitative Biology 2025-09-24 Raphael Eichhorn , Cornelia Pokalyuk

We analyze a within-host model of virus infection with antibody and CD8+ cytotoxic T lymphocyte (CTL) responses proposed by Schwartz et al. (2013). The goal of this work is to gain an overview of the stability of the biologically-relevant…

Populations and Evolution · Quantitative Biology 2022-02-14 Tyler Meadows , Elissa J. Schwartz

We propose a time-parameterized analogy between the thermodynamic behavior of a 3-level energy system and the progression of the HIV infection described by the cell population evolution generated by an appropriated cellular automata model.…

Populations and Evolution · Quantitative Biology 2020-06-24 Ramón E. R. González , P. H. Figueirêdo , S. Coutinho

Continuous cultures of mammalian cells are complex systems displaying hallmark phenomena of nonlinear dynamics, such as multi-stability, hysteresis, as well as sharp transitions between different metabolic states. In this context…

Molecular Networks · Quantitative Biology 2019-03-01 Jorge Fernandez-de-Cossio-Diaz , Roberto Mulet

The control of opportunistic infections among HIV infected individuals should be one of the major public health concerns in reducing mortality rate of individuals living with HIV/AIDS. In this study a deterministic co-infection mathematical…

Dynamical Systems · Mathematics 2024-08-02 Michael Byamukama , Damian Kajunguri , Martin Karuhanga

We consider multiple diseases spreading in a static Configuration Model network. We make standard assumptions that infection transmits from neighbor to neighbor at a disease-specific rate and infected individuals recover at a…

Populations and Evolution · Quantitative Biology 2015-06-11 Joel C. Miller

Interactions are ubiquitous across biological systems. These interactions can be abstracted as patterns of connections among distinct units such as genes, proteins, individual organisms, or species which form a hierarchy of biological…

Populations and Evolution · Quantitative Biology 2018-09-18 Pierre-Olivier Montiglio , Kiyoko M. Gotanda , Claudius F. Kratochwil , Kate L. Laskowski , Carey D. Nadell , Damien R. Farine

We use a cellular automata model to study the evolution of HIV infection and the onset of AIDS. The model takes into account the global features of the immune response to any pathogen, the fast mutation rate of the HIV and a fair amount of…

Statistical Mechanics · Physics 2009-10-31 Rita Maria Zorzenon dos Santos , Sergio Coutinho

Our $N$-intertwined model (now called NIMFA) for virus spread in any network with $N$ nodes is extended to a full heterogeneous setting. The metastable steady-state nodal infection probabilities are specified in terms of a generalized…

Optimization and Control · Mathematics 2014-07-14 Piet Van Mieghem , Jasmina Omic

We analyse the asymptotic behaviour of integro-differential equations modelling $N$ populations in interaction, all structured by different traits. Interactions are modelled by non-local terms involving linear combinations of the total…

Populations and Evolution · Quantitative Biology 2017-04-17 Camille Pouchol , Emmanuel Trélat

Recent clinical studies have shown that HIV disease pathogenesis can depend strongly on many factors at the time of transmission, including the strength of the initial viral load and the local availability of CD4+ T-cells. In this article,…

Populations and Evolution · Quantitative Biology 2019-10-15 Stephen Pankavich , Nathan Neri , Deborah Shutt

We study within-host HIV dynamics using a three--component nonlinear ordinary differential equation model for healthy CD4$^{+}$ T cells, infected CD4$^{+}$ T cells, and free virus. In addition to the baseline model without treatment, we…

Numerical Analysis · Mathematics 2025-12-16 Abdul Rab