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Modeling and optimization of metabolic networks has been one of the hottest topics in computational systems biology within recent years. However, the complexity and uncertainty of these networks in addition to the lack of necessary data has…

Molecular Networks · Quantitative Biology 2014-07-01 Erfan Khaji , Mahsa Mortazavi

We demonstrate the phenomenon of stochastic resonance (SR) for discrete-time dynamical systems. We investigate various systems that are not necessarily bistable, but do have two well defined states, switching between which is aided by…

chao-dyn · Physics 2009-10-30 Prashant M. Gade , Renuka Rai , Harjinder Singh

An analysis of discrete systems is important for understanding of various physical processes, such as excitations in crystal lattices and molecular chains, the light propagation in waveguide arrays, and the dynamics of Bose-condensate…

Pattern Formation and Solitons · Physics 2019-08-06 E. N. Tsoy , B. A. Umarov

This paper investigates first-order variable metric backward forward dynamical systems associated with monotone inclusion and convex minimization problems in real Hilbert space. The operators are chosen so that the backward-forward…

Optimization and Control · Mathematics 2021-06-15 Pankaj Gautam , D. R. Sahu , J. C. Yao

Nonlinear contact dynamics are widely regarded as intrinsically nonlinear systems whose behaviour depends strongly on geometry and impact conditions. Here we show that any one-dimensional conservative contact system satisfying monotone…

Dynamical Systems · Mathematics 2026-04-06 Y. T. Feng

We consider kinetic systems and prove their stability working in weighted spaces in which the systems are symmetric. We prove stability for various explicit and implicit semi-discrete and fully discrete schemes. The applications include…

Numerical Analysis · Mathematics 2017-08-07 F. Patricia Medina , Malgorzata Peszynska

Characterizing the emergence of chaotic dynamics of complex networks is an essential task in nonlinear science with potential important applications in many fields such as neural control engineering, microgrid technologies, and ecological…

Adaptation and Self-Organizing Systems · Physics 2024-04-29 Ricardo Chacón , Pedro J. Martínez

A model is proposed that describes the evolution of a mixed state of a quantum system for which gain and loss of energy or amplitude are present. Properties of the model are worked out in detail. In particular, invariant subspaces of the…

Quantum Physics · Physics 2012-12-06 Dorje C. Brody , Eva-Maria Graefe

The control properties of discrete-time switched linear systems (SLS) with switching signals generated by logical dynamic systems are studied using the semi-tensor product (STP) approach. With the algebraic state space representation…

Systems and Control · Electrical Eng. & Systems 2024-01-08 Xiao Zhang , Min Meng , Zhengping Ji

Nonlinear models and optimization methods have successfully tackled a rapidly growing set of problems in recent years. Indeed, a relatively small toolbox of such models and methods can provide sufficient performance across a large landscape…

Optimization and Control · Mathematics 2026-05-01 Akshunna S. Dogra

We study expansive dynamical systems in the setting of distributive lattices and their automorphisms, the usual notion of expansiveness for a homeomorphism of a compact metric space being the particular case when the lattice is the topology…

Dynamical Systems · Mathematics 2019-11-06 Mauricio Achigar

Dynamics in correlated quantum matter is a hard problem, as its exact solution generally involves a computational effort that grows exponentially with the number of constituents. While a remarkable progress has been witnessed in recent…

Strongly Correlated Electrons · Physics 2021-04-28 Roberto Verdel , Markus Schmitt , Yi-Ping Huang , Petr Karpov , Markus Heyl

We show that nonequilibrium dynamics can play a constructive role in unsupervised machine learning by inducing the spontaneous emergence of latent-state cycles. We introduce a model in which visible and hidden variables interact through two…

Statistical Mechanics · Physics 2026-05-05 Marco Baiesi , Alberto Rosso

Time-dependent density functional theory, proposed recently in the context of atomic diffusion and non-equilibrium processes in solids, is tested against Monte Carlo simulation. In order to assess the basic approximation of that theory, the…

Statistical Mechanics · Physics 2009-11-07 M. Kessler , W. Dieterich , H. L. Frisch , J. F. Gouyet , P. Maass

Considering deterministic classical lattice systems with continuous variables, we show that, if the initial conditions are sampled according to a probability distribution in which the dynamical variables are statistically independent, the…

Statistical Mechanics · Physics 2025-10-29 Nicolas Nessi , Peter Reimann

We study long-range interacting systems driven by external stochastic forces that act collectively on all the particles constituting the system. Such a scenario is frequently encountered in the context of plasmas, self-gravitating systems,…

Statistical Mechanics · Physics 2013-12-03 Cesare Nardini , Shamik Gupta , Stefano Ruffo , Thierry Dauxois , Freddy Bouchet

Dynamic networks are used in a variety of fields to represent the structure and evolution of the relationships between entities. We present a model which embeds longitudinal network data as trajectories in a latent Euclidean space. A Markov…

Methodology · Statistics 2020-05-19 Daniel K. Sewell , Yuguo Chen

Nonequilibrium collective motion is ubiquitous in nature and often results in a rich collection of intringuing phenomena, such as the formation of shocks or patterns, subdiffusive kinetics, traffic jams, and nonequilibrium phase…

Statistical Mechanics · Physics 2011-12-20 Mauro Mobilia , Tobias Reichenbach , Hauke Hinsch , Thomas Franosch , Erwin Frey

We consider a linear dynamical system in which the state vector consists of both public and private states. One or more sensors make measurements of the state vector and sends information to a fusion center, which performs the final state…

Information Theory · Computer Science 2019-07-19 Yang Song , Chong Xiao Wang , Wee Peng Tay

The scope of analog simulation in atomic, molecular, and optical systems has expanded greatly over the past decades. Recently, the idea of synthetic dimensions -- in which transport occurs in a space spanned by internal or motional states…

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