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The Graph Isomorphism problem restricted to graphs of bounded treewidth or bounded tree distance width are known to be solvable in polynomial time [Bod90],[YBFT99]. We give restricted space algorithms for these problems proving the…

Computational Complexity · Computer Science 2010-02-03 Bireswar Das , Jacobo Toran , Fabian Wagner

Twin-width is a recently formulated graph and matrix invariant that intuitively quantifies how far a graph is from having the structural simplicity of a co-graph. Since its introduction in 2020, twin-width has received increasing attention…

Data Structures and Algorithms · Computer Science 2025-11-11 Andrei Arhire , Matei Chiriac , Radu Timofte

There are several common ways to encode a tree as a matrix, such as the adjacency matrix, the Laplacian matrix (that is, the infinitesimal generator of the natural random walk), and the matrix of pairwise distances between leaves. Such…

Populations and Evolution · Quantitative Biology 2007-05-23 Frederick A. Matsen , Steven N. Evans

Color-constrained subgraph problems are those where we are given an edge-colored (directed or undirected) graph and the task is to find a specific type of subgraph, like a spanning tree, an arborescence, a single-source shortest path tree,…

Data Structures and Algorithms · Computer Science 2024-07-24 P. S. Ardra , Jasine Babu , Kritika Kashyap , R. Krithika , Sreejith K. Pallathumadam , Deepak Rajendraprasad

The study of structural graph width parameters like tree-width, clique-width and rank-width has been ongoing during the last five decades, and their algorithmic use has also been increasing [Cygan et al., 2015]. New width parameters…

Data Structures and Algorithms · Computer Science 2025-01-23 Flavia Bonomo-Braberman , Eric Brandwein , Carolina Lucía González , Agustín Sansone

A recent paper \cite{CaeCaeSchBar06} proposed a provably optimal, polynomial time method for performing near-isometric point pattern matching by means of exact probabilistic inference in a chordal graphical model. Their fundamental result…

Computer Vision and Pattern Recognition · Computer Science 2007-10-03 Julian J. McAuley , Tiberio S. Caetano , Marconi S. Barbosa

We consider the classical problems (Edge) Steiner Tree and Vertex Steiner Tree after restricting the input to some class of graphs characterized by a small set of forbidden induced subgraphs. We show a dichotomy for the former problem…

Data Structures and Algorithms · Computer Science 2020-12-17 Hans Bodlaender , Nick Brettell , Matthew Johnson , Giacomo Paesani , Daniel Paulusma , Erik Jan van Leeuwen

For causal discovery in the presence of latent confounders, constraints beyond conditional independences exist that can enable causal discovery algorithms to distinguish more pairs of graphs. Such constraints are not well-understood yet. In…

Machine Learning · Computer Science 2024-06-14 Thijs van Ommen

The maximum/minimum bisection problems are, given an edge-weighted graph, to find a bipartition of the vertex set into two sets whose sizes differ by at most one, such that the total weight of edges between the two sets is…

Data Structures and Algorithms · Computer Science 2020-09-17 Tesshu Hanaka , Yasuaki Kobayashi , Taiga Sone

Entanglement is a complexity measure of directed graphs that origins in fixed point theory. This measure has shown its use in designing efficient algorithms to verify logical properties of transition systems. We are interested in the…

Logic in Computer Science · Computer Science 2009-04-09 Walid Belkhir , Luigi Santocanale

Recent work has shown that not only decision trees (DTs) may not be interpretable but also proposed a polynomial-time algorithm for computing one PI-explanation of a DT. This paper shows that for a wide range of classifiers, globally…

Artificial Intelligence · Computer Science 2021-06-24 Xuanxiang Huang , Yacine Izza , Alexey Ignatiev , Joao Marques-Silva

This work addresses the intrinsic relationship between trees and networks (i.e. graphs). A complete (invertible) mapping is presented which allows trees to be mapped into weighted graphs and then backmapped into the original tree without…

Physics and Society · Physics 2008-08-07 Luciano da Fontoura Costa , Francisco Aparecido Rodrigues

Courcelle's Theorem is an important result in graph theory, proving the existence of linear-time algorithms for many decision problems on graphs whose tree-width is bounded by a constant. The purpose of this text is twofold: to provide an…

Combinatorics · Mathematics 2024-05-03 Adrian Rettich

Intersection graphs are well-studied in the area of graph algorithms. Some intersection graph classes are known to have algorithms enumerating all unlabeled graphs by reverse search. Since these algorithms output graphs one by one and the…

Data Structures and Algorithms · Computer Science 2022-12-15 Jun Kawahara , Toshiki Saitoh , Hirokazu Takeda , Ryo Yoshinaka , Yui Yoshioka

It is well known that the coefficients of the matching polynomial are unimodal. Unimodality of the coefficients (or their absolute values) of other graph polynomials have been studied as well. One way to prove unimodality is to prove…

Combinatorics · Mathematics 2022-10-19 Johann A. Makowsky , Vsevolod Rakita

A graph is odd if all of its vertices have odd degrees. In particular, an odd spanning tree in a connected graph is a spanning tree in which all vertices have odd degrees. In this paper we establish a unified technique to enumerate odd…

Combinatorics · Mathematics 2026-02-10 Shaohan Xu , Kexiang Xu

It's important to design polynomial time algorithms to test if two graphs are isomorphic at least for some special classes of graphs. An approach to this was presented by Eugene M. Luks(1981) in the work \textit{Isomorphism of Graphs of…

Discrete Mathematics · Computer Science 2012-09-06 Adria Alcala Mena

This paper has dual aims. First is to develop practical universal coding methods for unlabeled graphs. Second is to use these for graph anomaly detection. The paper develops two coding methods for unlabeled graphs: one based on the degree…

Information Theory · Computer Science 2018-04-10 Anders Host-Madsen , June Zhang

Frequent pattern mining is a relevant method to analyse structured data, like sequences, trees or graphs. It consists in identifying characteristic substructures of a dataset. This paper deals with a new type of patterns for tree data:…

Data Structures and Algorithms · Computer Science 2024-01-05 Romain Azaïs , Florian Ingels

The graph isomorphism problem has a long history in mathematics and computer science, with applications in computational chemistry and biology, and it is believed to be neither solvable in polynomial time nor NP-complete. E. Luks proposed…

Discrete Mathematics · Computer Science 2012-09-06 Adria Alcala Mena , Francesc Rossello