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Security issue reports are the primary means of informing development teams of security risks in projects, but little is known about current practices. We aim to understand the characteristics of these reports in open-source projects and…

Cryptography and Security · Computer Science 2021-12-21 Noah Bühlmann , Mohammad Ghafari

Many software developers rely on open source software for developing their applications and writing their source codes. Measuring an independent project's overall productivity is still an open problem for many technology companies. In this…

Software Engineering · Computer Science 2022-03-30 Sairamvinay Vijayaraghavan , Jinxiao Song , Terry Guan , Seongwoo Choi , Sutej Kulkarni

This document explores the advantages of integrating open source software and practices in managing a scientific lab, emphasizing reproducibility and the avoidance of pitfalls. It details practical applications from website management using…

Computers and Society · Computer Science 2024-05-14 Julien Cohen-Adad

With the urgent need to secure supply chains among Open Source libraries, attention has focused on mitigating vulnerabilities detected in these libraries. Although awareness has improved recently, most studies still report delays in the…

Software Engineering · Computer Science 2024-06-18 Ruksit Rojpaisarnkit , Hathaichanok Damrongsiri , Christoph Treude , Ali Ouni , Raula Gaikovina Kula

In the world of open-source software (OSS), the number of known vulnerabilities has tremendously increased. The GitHub Advisory Database contains advisories for security risks in GitHub-hosted OSS projects. As of 09/25/2023, there are…

Cryptography and Security · Computer Science 2025-01-30 Jessy Ayala , Yu-Jye Tung , Joshua Garcia

Background: Open source software has an increasing importance in modern software development. However, there is also a growing concern on the sustainability of such projects, which are usually managed by a small number of developers,…

Software Engineering · Computer Science 2019-01-31 Jailton Coelho , Marco Tulio Valente , Luciana L. Silva , Emad Shihab

Online collaboration platforms such as GitHub have provided software developers with the ability to easily reuse and share code between repositories. With clone-and-own and forking becoming prevalent, maintaining these shared files is…

Software Engineering · Computer Science 2021-02-15 Hideaki Hata , Raula Gaikovina Kula , Takashi Ishio , Christoph Treude

Context: GitHub hosts an impressive number of high-quality OSS projects. However, selecting "the right tool for the job" is a challenging task, because we do not have precise information about those high-quality projects. Objective: In this…

Software Engineering · Computer Science 2020-03-11 Jailton Coelho , Marco Tulio Valente , Luciano Milen , Luciana L. Silva

Linux users expect fresh packages in the official repositories of their distributions. Yet, due to philosophical divergences, the packages available in various distributions do not all have the same degree of freshness. Users therefore need…

Software Engineering · Computer Science 2021-03-17 Damien Legay , Alexandre Decan , Tom Mens

Data from software repositories have become an important foundation for the empirical study of software engineering processes. A recurring theme in the repository mining literature is the inference of developer networks capturing e.g.…

Software Engineering · Computer Science 2019-11-22 Christoph Gote , Ingo Scholtes , Frank Schweitzer

Open-source software (OSS) supply chain security has become a topic of concern for organizations. Patching an OSS vulnerability can require updating other dependent software products in addition to the original package. However, the…

Software Engineering · Computer Science 2024-04-19 Cadence Patrick , Kimberly Ruth , Zakir Durumeric

As modern software extensively uses free open source packages as dependencies, developers have to regularly pull in new third-party code through frequent updates. However, without a proper review of every incoming change, vulnerable and…

Software Engineering · Computer Science 2022-11-08 Nasif Imtiaz , Laurie Williams

Are malicious repositories hiding under the educational label in GitHub? Recent studies have identified collections of GitHub repositories hosting malware source code with notable collaboration among the developers. Thus, analyzing GitHub…

Software Engineering · Computer Science 2024-03-08 Md Rayhanul Masud , Michalis Faloutsos

Source code repositories allow developers to manage multiple versions (or branches) of a software system. Pull-requests are used to modify a branch, and backporting is a regular activity used to port changes from a current development…

Software Engineering · Computer Science 2022-04-11 Debasish Chakroborti , Kevin A. Schneider , Chanchal K. Roy

Background: Data mining and analyzing of public Git software repositories is a growing research field. The tools used for studies that investigate a single project or a group of projects have been refined, but it is not clear whether the…

Software Engineering · Computer Science 2020-08-18 Adam Tutko , Austin Henley , Audris Mockus

Package managers have become a vital part of the modern software development process. They allow developers to reuse third-party code, share their own code, minimize their codebase, and simplify the build process. However, recent reports…

Cryptography and Security · Computer Science 2020-12-03 Ruian Duan , Omar Alrawi , Ranjita Pai Kasturi , Ryan Elder , Brendan Saltaformaggio , Wenke Lee

The 1000 Genomes Project provides sequencing data on 3,202 samples from 26 populations spanning five continental regions with no access or use restrictions. The kgp R package provides consistent and comprehensive metadata about samples and…

Genomics · Quantitative Biology 2022-10-04 Stephen D. Turner

Software ecosystems rely on centralized package registries, such as Maven, to enable code reuse and collaboration. However, the interconnected nature of these ecosystems amplifies the risks posed by security vulnerabilities in direct and…

Software Engineering · Computer Science 2025-02-18 Corey Yang-Smith , Ahmad Abdellatif

Energy efficiency has become a growing concern in software development, leading to the need for tools designed to measure energy consumption. While several energy measurement tools are available as open-source projects, their…

Software Engineering · Computer Science 2026-03-24 Manuela Bechara Cannizza , Michel Albonico

Developers collaboratively discuss, implement, use, and share software entities hosted on software repositories. Proper documentation plays an important role in successful software management and maintenance. Users exploit Issue Tracking…

Software Engineering · Computer Science 2021-09-29 Maliheh Izadi , Kiana Akbari , Abbas Heydarnoori