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We consider the problem of computing the q-gram profile of a string \str of size $N$ compressed by a context-free grammar with $n$ production rules. We present an algorithm that runs in $O(N-\alpha)$ expected time and uses $O(n+q+\kq)$…

Data Structures and Algorithms · Computer Science 2014-06-09 Philip Bille , Patrick Hagge Cording , Inge Li Gørtz

We present the first in-place algorithm for sorting an array of size n that performs, in the worst case, at most O(n log n) element comparisons and O(n) element transports. This solves a long-standing open problem, stated explicitly, e.g.,…

Data Structures and Algorithms · Computer Science 2007-05-23 Gianni Franceschini , Viliam Geffert

The problem of non-monotone $k$-submodular maximization under a knapsack constraint ($\kSMK$) over the ground set size $n$ has been raised in many applications in machine learning, such as data summarization, information propagation, etc.…

Data Structures and Algorithms · Computer Science 2023-09-22 Dung T. K. Ha , Canh V. Pham , Tan D. Tran , Huan X. Hoang

We revisit the problem of finding shortest unique substring (SUS) proposed recently by [6]. We propose an optimal $O(n)$ time and space algorithm that can find an SUS for every location of a string of size $n$. Our algorithm significantly…

Data Structures and Algorithms · Computer Science 2014-01-14 Atalay Mert İleri , M. Oğuzhan Külekci , Bojian Xu

We show new algorithms and constructions over linear delta-matroids. We observe an alternative representation for linear delta-matroids, as a contraction representation over a skew-symmetric matrix. This is equivalent to the more standard…

Data Structures and Algorithms · Computer Science 2024-02-20 Tomohiro Koana , Magnus Wahlström

A line of work initiated by Fortnow in 1997 has proven model-independent time-space lower bounds for the $\mathsf{SAT}$ problem and related problems within the polynomial-time hierarchy. For example, for the $\mathsf{SAT}$ problem, the…

Computational Complexity · Computer Science 2021-02-01 Abhijit S. Mudigonda , R. Ryan Williams

Motivated by information retrieval applications, we consider the one-dimensional colored range reporting problem in rank space. The goal is to build a static data structure for sets C_1,...,C_m \subseteq {1,...,sigma} that supports queries…

Data Structures and Algorithms · Computer Science 2015-03-19 Kasper Green Larsen , Rasmus Pagh

Grammar-based compression, where one replaces a long string by a small context-free grammar that generates the string, is a simple and powerful paradigm that captures many popular compression schemes. Given a grammar, the random access…

Data Structures and Algorithms · Computer Science 2016-11-17 Philip Bille , Anders Roy Christiansen , Patrick Hagge Cording , Inge Li Gørtz

Monotonicity is a simple yet significant qualitative characteristic. We consider the problem of segmenting a sequence in up to K segments. We want segments to be as monotonic as possible and to alternate signs. We propose a quality metric…

Databases · Computer Science 2009-09-01 Daniel Lemire , Martin Brooks , Yuhong Yan

In the problem of $\texttt{Generalised Pattern Matching}\ (\texttt{GPM})$ [STOC'94, Muthukrishnan and Palem], we are given a text $T$ of length $n$ over an alphabet $\Sigma_T$, a pattern $P$ of length $m$ over an alphabet $\Sigma_P$, and a…

Data Structures and Algorithms · Computer Science 2020-01-20 Bartłomiej Dudek , Paweł Gawrychowski , Tatiana Starikovskaya

Suffix arrays and LCP arrays are one of the most fundamental data structures widely used for various kinds of string processing. We consider two problems for a read-only string of length $N$ over an integer alphabet $[1, \dots, \sigma]$ for…

Data Structures and Algorithms · Computer Science 2019-07-16 Keisuke Goto

Suppose an oracle knows a string $S$ that is unknown to us and that we want to determine. The oracle can answer queries of the form "Is $s$ a substring of $S$?". In 1995, Skiena and Sundaram showed that, in the worst case, any algorithm…

Data Structures and Algorithms · Computer Science 2021-10-20 Gabriele Fici , Nicola Prezza , Rossano Venturini

In recent years, several powerful techniques have been developed to design {\em randomized} polynomial-space parameterized algorithms. In this paper, we introduce an enhancement of color coding to design deterministic polynomial-space…

Data Structures and Algorithms · Computer Science 2017-12-20 Gregory Gutin , Felix Reidl , Magnus Wahlström , Meirav Zehavi

The representation of a dynamic ordered set of $n$ integer keys drawn from a universe of size $m$ is a fundamental data structuring problem. Many solutions to this problem achieve optimal time but take polynomial space, therefore preserving…

Data Structures and Algorithms · Computer Science 2020-03-27 Giulio Ermanno Pibiri , Rossano Venturini

In this work, we study the classic submodular maximization problem under knapsack constraints and beyond. We first present an $(7/16-\varepsilon)$-approximate algorithm for single knapsack constraint, which requires…

Data Structures and Algorithms · Computer Science 2020-12-22 Wenxin Li

Given two rooted, ordered, and labeled trees $P$ and $T$ the tree inclusion problem is to determine if $P$ can be obtained from $T$ by deleting nodes in $T$. This problem has recently been recognized as an important query primitive in XML…

Data Structures and Algorithms · Computer Science 2011-01-19 Philip Bille , Inge Li Goertz

Given a set $Z$ of $n$ positive integers and a target value $t$, the Subset Sum problem asks whether any subset of $Z$ sums to $t$. A textbook pseudopolynomial time algorithm by Bellman from 1957 solves Subset Sum in time $O(nt)$. This has…

Data Structures and Algorithms · Computer Science 2017-01-10 Karl Bringmann

Efficient optimal prefix coding has long been accomplished via the Huffman algorithm. However, there is still room for improvement and exploration regarding variants of the Huffman problem. Length-limited Huffman coding, useful for many…

Information Theory · Computer Science 2007-07-13 Michael B. Baer

The metric $k$-median problem is a textbook clustering problem. As input, we are given a metric space $V$ of size $n$ and an integer $k$, and our task is to find a subset $S \subseteq V$ of at most $k$ `centers' that minimizes the total…

Data Structures and Algorithms · Computer Science 2026-03-31 Martín Costa , Ermiya Farokhnejad

In the classical interval scheduling type of problems, a set of $n$ jobs, characterized by their start and end time, need to be executed by a set of machines, under various constraints. In this paper we study a new variant in which the jobs…

Data Structures and Algorithms · Computer Science 2015-11-02 Veli Mäkinen , Valeria Staneva , Alexandru Tomescu , Daniel Valenzuela
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