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We review recent computer simulation studies of undulating lipid bilayers. Theoretical interpretations of such fluctuating membranes are most commonly based on generalized Helfrich-type elastic models, with additional contributions of local…

Biological Physics · Physics 2013-09-03 Friederike Schmid

Water distribution networks (WDNs) expand their service areas over time. These growth dynamics are poorly understood. One facet of WDNs is that they have loops in general, and closing loops may be a functionally important process for…

Physics and Society · Physics 2021-11-30 Kashin Sugishita , Noha Abdel-Mottaleb , Qiong Zhang , Naoki Masuda

We implement Kolmogorov-Uspensky machine on a plasmodium of true slime mold {\em Physarum polycephalum}. We provide experimental findings on realization of the machine instructions, illustrate basic operations, and elements of programming.

Hardware Architecture · Computer Science 2010-11-23 Andrew Adamatzky

The tensile force along a cylindrical lipid bilayer tube is proportional to the membrane's bending modulus and inversely proportional to the tube radius. We show that this relation, which is experimentally exploited to measure bending…

Soft Condensed Matter · Physics 2007-05-23 Vagelis A. Harmandaris , Markus Deserno

Transport networks are crucial to the functioning of natural systems and technological infrastructures. For flow networks in many scenarios, such as rivers or blood vessels, acyclic networks (i.e., trees) are optimal structures when…

Adaptation and Self-Organizing Systems · Physics 2019-12-05 Erik Andreas Martens , Konstantin Klemm

Understanding the complex patterns in space-time exhibited by active systems has been the subject of much interest in recent times. Complementing this forward problem is the inverse problem of controlling active matter. Here we use optimal…

Soft Condensed Matter · Physics 2022-10-12 Suraj Shankar , Vidya Raju , L. Mahadevan

Three-dimensional turbulence simulations of a RFX-mod diverted plasma are performed in the presence of a biasing electrode. The simulations show a strong suppression of turbulent transport caused by the induced $\mathbf{E}\times\mathbf{B}$…

Plasma Physics · Physics 2025-02-17 M. Giacomin , N. Vianello , R. Cavazzana , S. Molisani , M. Spolaore , M. Zuin

Cilia and flagella are actively bending slender organelles, performing functions such as motility, feeding and embryonic symmetry breaking. We review the mechanics of viscous-dominated microscale flow, including time-reversal symmetry, drag…

Quantitative Methods · Quantitative Biology 2013-09-06 Thomas D. Montenegro-Johnson , Andrew A. Smith , David J. Smith , Daniel Loghin , John R. Blake

Many cells exploit the bending or rotation of flagellar filaments in order to self-propel in viscous fluids. While appropriate theoretical modelling is available to capture flagella locomotion in simple, Newtonian fluids, formidable…

Biological Physics · Physics 2017-08-02 Emily E. Riley , Eric Lauga

The non-equilibrium structural and dynamical properties of a semiflexible polymer confined in a cylindrical microchannel and exposed to a Poiseuille flow is studied by mesoscale hydrodynamic simulations. For a polymer with a length half of…

Soft Condensed Matter · Physics 2010-08-09 Raghunath Chelakkot , Roland. G. Winkler , Gerhard Gompper

We investigate a two-dimensional network simulator capable of modeling different time dependencies in two-phase drainage displacements. In particular, we focus on the temporal evolution of the pressure due to capillary and viscous forces…

Fluid Dynamics · Physics 2008-02-03 Eyvind Aker , Knut Jorgen Maloy , Alex Hansen , G. George Batrouni

It was hypothesized that the structures of biological transport networks are the result of either energy consumption or adaptation dynamics. Although approaches based on these hypotheses can produce optimal network and form loop structures,…

Biological Physics · Physics 2024-09-13 Yawei Wang , Zilu Qin , Yubo Fan

This work proposes a new mathematical model for the TCP/AQM system that aims to improve the accuracy of existing fluid models, especially with respect to the sequential events that occur in the network. The analysis is based on the…

Systems and Control · Electrical Eng. & Systems 2022-11-22 Sadek Belamfedel Alaoui , Alejandro J. Rojas , Abdelaziz Hmamed , El Houssaine Tissir

The dynamics of flow within a material transport network is dependent upon the dynamics of its power source. Responding to a change of these dynamics is critical for the fitness of living flow networks, e.g. the animal vasculature, which…

Fluid Dynamics · Physics 2021-09-29 Sean Fancher , Eleni Katifori

The thermodynamics and dynamics of supercooled liquids correlate with their elasticity. In particular for covalent networks, the jump of specific heat is small and the liquid is {\it strong} near the threshold valence where the network…

Disordered Systems and Neural Networks · Physics 2015-09-02 Le Yan , Matthieu Wyart

Based on the properties of large-scale plume currents, an injection/suction control strategy is introduced to enhance the strength of plume currents and the turbulent transport of passive scalar in rotating plane Poiseuille flow. The…

Fluid Dynamics · Physics 2022-01-25 Shengqi Zhang , Zhenhua Xia , Shiyi Chen

Superhydrophobic one-dimensional surfaces reduce drag and generate transverse hydrodynamic phenomena by combining hydrophobicity and roughness to trap gas bubbles in microscopic textures. Recent works in this area have focused on specific…

Fluid Dynamics · Physics 2014-01-23 Tatiana V. Nizkaya , Evgeny S. Asmolov , Olga I. Vinogradova

This work presents a mathematical model for the optimal control of thin-film flows over a flexible topography influenced by an external force. Our thin-film model allows for the rupture of films as well as the coalescence of bubbles. The…

Optimization and Control · Mathematics 2025-06-19 S. Alrashidy , A. Kalogirou , D. Kalise , K. G. van der Zee

A model for the development of turbulent shear flows, created by non-uniform parallel flows in a confining channel, is used to identify the diffuser shape that maximises pressure recovery when the inflow is non-uniform. Wide diffuser angles…

Fluid Dynamics · Physics 2018-04-09 GP Benham , IJ Hewitt , CP Please , P Bird

The current energy transition promotes the convergence of operation between the power and natural gas systems. In that direction, it becomes paramount to improve the modeling of non-convex natural gas flow dynamics within the coordinated…

Systems and Control · Electrical Eng. & Systems 2022-09-27 Adriano Arrigo , Mihály Dolányi , Kenneth Bruninx , Jean-François Toubeau