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Related papers: De-identification of Patient Notes with Recurrent …

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In the era of big data, there is an increasing need for healthcare providers, communities, and researchers to share data and collaborate to improve health outcomes, generate valuable insights, and advance research. The Health Insurance…

Cryptography and Security · Computer Science 2023-05-23 Kai Zhang , Xiaoqian Jiang

Use of medical data, also known as electronic health records, in research helps develop and advance medical science. However, protecting patient confidentiality and identity while using medical data for analysis is crucial. Medical data can…

Artificial Intelligence · Computer Science 2018-10-17 Vithya Yogarajan , Michael Mayo , Bernhard Pfahringer

Privacy is a human right that sustains patient-provider trust. Clinical notes capture a patient's private vulnerability and individuality, which are used for care coordination and research. Under HIPAA Safe Harbor, these notes are…

Computers and Society · Computer Science 2026-02-10 Lavender Y. Jiang , Xujin Chris Liu , Kyunghyun Cho , Eric K. Oermann

Unstructured textual data is at the heart of healthcare systems. For obvious privacy reasons, these documents are not accessible to researchers as long as they contain personally identifiable information. One way to share this data while…

Cryptography and Security · Computer Science 2022-11-03 Yakini Tchouka , Jean-François Couchot , David Laiymani

Objective: To enhance automated de-identification of radiology reports by scaling transformer-based models through extensive training datasets and benchmarking performance against commercial cloud vendor systems for protected health…

Computation and Language · Computer Science 2025-11-24 Eva Prakash , Maayane Attias , Pierre Chambon , Justin Xu , Steven Truong , Jean-Benoit Delbrouck , Tessa Cook , Curtis Langlotz

Electronic Medical Records (EMRs) contain clinical narrative text that is of great potential value to medical researchers. However, this information is mixed with Personally Identifiable Information (PII) that presents risks to patient and…

Computation and Language · Computer Science 2022-10-05 Leibo Liu , Oscar Perez-Concha , Anthony Nguyen , Vicki Bennett , Louisa Jorm

Named Entity Recognition (NER) has been mostly studied in the context of written text. Specifically, NER is an important step in de-identification (de-ID) of medical records, many of which are recorded conversations between a patient and a…

Computation and Language · Computer Science 2019-05-07 Ido Cohn , Itay Laish , Genady Beryozkin , Gang Li , Izhak Shafran , Idan Szpektor , Tzvika Hartman , Avinatan Hassidim , Yossi Matias

Recent approaches based on artificial neural networks (ANNs) have shown promising results for named-entity recognition (NER). In order to achieve high performances, ANNs need to be trained on a large labeled dataset. However, labels might…

Computation and Language · Computer Science 2017-05-18 Ji Young Lee , Franck Dernoncourt , Peter Szolovits

For sharing privacy-sensitive data, de-identification is commonly regarded as adequate for safeguarding privacy. Synthetic data is also being considered as a privacy-preserving alternative. Recent successes with numerical and tabular data…

Computation and Language · Computer Science 2025-03-05 Atiquer Rahman Sarkar , Yao-Shun Chuang , Noman Mohammed , Xiaoqian Jiang

Removing patient-specific information from medical images is crucial to enable sharing and open science without compromising patient identities. However, many methods currently used for deidentification have negative effects on downstream…

Computer Vision and Pattern Recognition · Computer Science 2026-04-14 Adrienne Kline , Abhijit Gaonkar , Daniel Pittman , Chris Kuehn , Nils Forkert

Clinicians spend a significant amount of time inputting free-form textual notes into Electronic Health Records (EHR) systems. Much of this documentation work is seen as a burden, reducing time spent with patients and contributing to…

Computation and Language · Computer Science 2018-08-09 Peter J. Liu

Mining health data can lead to faster medical decisions, improvement in the quality of treatment, disease prevention, reduced cost, and it drives innovative solutions within the healthcare sector. However, health data is highly sensitive…

Cryptography and Security · Computer Science 2022-04-28 Iyiola E. Olatunji , Jens Rauch , Matthias Katzensteiner , Megha Khosla

Access to medical imaging and associated text data has the potential to drive major advances in healthcare research and patient outcomes. However, the presence of Protected Health Information (PHI) and Personally Identifiable Information…

Machine Learning · Statistics 2025-08-01 Kyle Naddeo , Nikolas Koutsoubis , Rahul Krish , Ghulam Rasool , Nidhal Bouaynaya , Tony OSullivan , Raj Krish

The increasing availability of sensitive textual data has created an urgent need for robust de-identification methods that enable compliant data sharing while preserving downstream utility. This paper presents DeID-Clinic, a multi-layered…

Computation and Language · Computer Science 2026-05-26 Angel Paul , Dhivin Shaji , Lifeng Han , Warren Del-Pinto , Goran Nenadic , Suzan Verberne

Protected health information (PHI) de-identification is critical for enabling the safe reuse of clinical notes, yet evaluating and comparing PHI de-identification models typically depends on costly, small-scale expert annotations. We…

Artificial Intelligence · Computer Science 2025-11-19 Guanchen Wu , Zuhui Chen , Yuzhang Xie , Carl Yang

Motivation: Electronic Health Records (EHR) represent a comprehensive resource of a patient's medical history. EHR are essential for utilizing advanced technologies such as deep learning (DL), enabling healthcare providers to analyze…

Machine Learning · Computer Science 2024-07-24 Mohammad Al Olaimat , Serdar Bozdag

Data sharing is crucial for open science and reproducible research, but the legal sharing of clinical data requires the removal of protected health information from electronic health records. This process, known as de-identification, is…

Machine Learning · Computer Science 2024-01-04 Yuxin Xiao , Shulammite Lim , Tom Joseph Pollard , Marzyeh Ghassemi

With the rise and ever-increasing potential of deep learning techniques in recent years, publicly available medical datasets became a key factor to enable reproducible development of diagnostic algorithms in the medical domain. Medical data…

Computer Vision and Pattern Recognition · Computer Science 2022-09-05 Kai Packhäuser , Sebastian Gündel , Nicolas Münster , Christopher Syben , Vincent Christlein , Andreas Maier

Privacy protection of medical image data is challenging. Even if metadata is removed, brain scans are vulnerable to attacks that match renderings of the face to facial image databases. Solutions have been developed to de-identify diagnostic…

Image and Video Processing · Electrical Eng. & Systems 2021-10-20 Lennart Alexander Van der Goten , Tobias Hepp , Zeynep Akata , Kevin Smith

Monitoring the health status of patients in the Intensive Care Unit (ICU) is a critical aspect of providing superior care and treatment. The availability of large-scale electronic health records (EHR) provides machine learning models with…

Artificial Intelligence · Computer Science 2023-05-05 Jun Wu , Xuesong Ye , Chengjie Mou , Weinan Dai