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We propose a topological framework for memory and inference grounded in the structure of spike-timing dynamics, persistent homology, and the Context-Content Uncertainty Principle (CCUP). Starting from the observation that polychronous…

Neurons and Cognition · Quantitative Biology 2025-08-19 Xin Li

A central problem to understanding intelligence is the concept of generalisation. This allows previously learnt structure to be exploited to solve tasks in novel situations differing in their particularities. We take inspiration from…

Artificial Intelligence · Computer Science 2018-10-30 James C. R. Whittington , Timothy H. Muller , Shirley Mark , Caswell Barry , Timothy E. J. Behrens

A variety of behaviors like spatial navigation or bodily motion can be formulated as graph traversal problems through cognitive maps. We present a neural network model which can solve such tasks and is compatible with a broad range of…

Neural and Evolutionary Computing · Computer Science 2021-10-12 Henry Powell , Mathias Winkel , Alexander V. Hopp , Helmut Linde

Many neural systems display cascading behavior characterized by uninterrupted sequences of neuronal firing. This gap precludes an understanding of how variations in network structure manifest in neural dynamics and either support or impinge…

Neurons and Cognition · Quantitative Biology 2019-11-12 Harang Ju , Jason Z. Kim , Danielle S. Bassett

In the present study we have used a set of methods and metrics to build a graph of relative neural connections in a hippocampus of a rodent. A set of graphs was built on top of time-sequenced data and analyzed in terms of dynamics of a…

Neurons and Cognition · Quantitative Biology 2023-08-08 Konstantin Sorokin , Andrey Zaitsew , Aleksandr Levin , German Magai , Maxim Beketov , Vladimir Sotskov

The neural mechanisms supporting flexible relational inferences, especially in novel situations, are a major focus of current research. In the complementary learning systems framework, pattern separation in the hippocampus allows rapid…

Neurons and Cognition · Quantitative Biology 2021-05-20 Jacob Russin , Maryam Zolfaghar , Seongmin A. Park , Erie Boorman , Randall C. O'Reilly

The extraordinary computational power of the brain may be related in part to the fact that each of the smaller neural networks that compose it can behave transiently in many different ways, depending on its inputs. Mathematically, input…

Neurons and Cognition · Quantitative Biology 2008-03-29 Léonard Gérard , Jean-Jacques Slotine

We propose a normative model for spatial representation in the hippocampal formation that combines optimality principles, such as maximizing coding range and spatial information per neuron, with an algebraic framework for computing in…

Neurons and Cognition · Quantitative Biology 2024-06-28 Christopher J. Kymn , Sonia Mazelet , Anthony Thomas , Denis Kleyko , E. Paxon Frady , Friedrich T. Sommer , Bruno A. Olshausen

We investigate dynamical systems characterized by a time series of distinct semi-stable activity patterns, as they are observed in cortical neural activity patterns. We propose and discuss a general mechanism allowing for an adiabatic…

Disordered Systems and Neural Networks · Physics 2010-02-11 Claudius Gros

We introduce a novel approach to endowing neural networks with emergent, long-term, large-scale memory. Distinct from strategies that connect neural networks to external memory banks via intricately crafted controllers and hand-designed…

Machine Learning · Computer Science 2020-08-18 Tri Huynh , Michael Maire , Matthew R. Walter

Decades of research on the neural code underlying spatial navigation have revealed a diverse set of neural response properties. The Entorhinal Cortex (EC) of the mammalian brain contains a rich set of spatial correlates, including grid…

Neurons and Cognition · Quantitative Biology 2018-05-11 Christopher J. Cueva , Xue-Xin Wei

The standard model of memory consolidation foresees that memories are initially recorded in the hippocampus, while features that capture higher-level generalisations of data are created in the cortex, where they are stored for a possibly…

Neurons and Cognition · Quantitative Biology 2017-06-20 Alessandro Fontana

This thesis is a compendium of research which brings together ideas from the fields of Complex Networks and Computational Neuroscience to address two questions regarding neural systems: 1) How the activity of neurons, via synaptic changes,…

Neurons and Cognition · Quantitative Biology 2013-02-19 Samuel Johnson

We consider the slow and athermal deformations of amorphous solids and show how the ensuing sequence of discrete plastic rearrangements can be mapped onto a directed network. The network topology reveals a set of highly connected regions…

Soft Condensed Matter · Physics 2019-11-06 Muhittin Mungan , Srikanth Sastry , Karin Dahmen , Ido Regev

The representations learned by deep neural networks are difficult to interpret in part due to their large parameter space and the complexities introduced by their multi-layer structure. We introduce a method for computing persistent…

Machine Learning · Computer Science 2019-05-31 Thomas Gebhart , Paul Schrater , Alan Hylton

Synaptic plasticity allows cortical circuits to learn new tasks and to adapt to changing environments. How do cortical circuits use plasticity to acquire functions such as decision-making or working memory? Neurons are connected in complex…

Neurons and Cognition · Quantitative Biology 2023-03-08 Néstor Parga , Luis Serrano-Fernández , Joan Falcó-Roget

Network-structured data becomes ubiquitous in daily life and is growing at a rapid pace. It presents great challenges to feature engineering due to the high non-linearity and sparsity of the data. The local and global structure of the…

Machine Learning · Computer Science 2025-01-31 Xin Sun , Zenghui Song , Yongbo Yu , Junyu Dong , Claudia Plant , Christian Boehm

This paper is a cursory study on how topological features are preserved within the internal representations of neural network layers. Using techniques from topological data analysis, namely persistent homology, the topological features of a…

Machine Learning · Computer Science 2022-08-16 Archie Shahidullah

This paper introduces a topological framework for interpreting the internal representations of Multilayer Perceptrons (MLPs). We construct a simplicial tower, a sequence of simplicial complexes connected by simplicial maps, that captures…

Machine Learning · Computer Science 2025-06-03 Eduardo Paluzo-Hidalgo

In the era of intelligent computing, computational progress in text processing is an essential consideration. Many systems have been developed to process text over different languages. Though, there is considerable development, they still…

Artificial Intelligence · Computer Science 2020-02-26 Sumant Pushp , Pragya Kashmira , Shyamanta M Hazarika