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We consider the inverse-folding problem for RNA secondary structures: for a given (pseudo-knot-free) secondary structure find a sequence that has that structure as its ground state. If such a sequence exists, the structure is called…

Biological Physics · Physics 2015-06-26 Bernd Burghardt , Alexander K. Hartmann

We classify the twisted tensor products of a finite set algebra with a two elements set algebra using colored quivers obtained through considerations analogous to Ore extensions. This provides also a classification of entwining structures…

Rings and Algebras · Mathematics 2007-06-17 Claude Cibils

By a theorem due to the first author, the bounded derived category of a finite-dimensional algebra over a field embeds fully faithfully into the stable category over its repetitive algebra. This embedding is an equivalence iff the algebra…

Representation Theory · Mathematics 2007-05-23 Dieter Happel , Bernhard Keller , Idun Reiten

We call an $\alpha \in \mathbb{R}$ regainingly approximable if there exists a computable nondecreasing sequence $(a_n)_n$ of rational numbers converging to $\alpha$ with $\alpha - a_n < 2^{-n}$ for infinitely many $n \in \mathbb{N}$. We…

Logic · Mathematics 2026-02-11 Peter Hertling , Rupert Hölzl , Philip Janicki

A rotation-based synthesis framework for reversible logic is proposed. We develop a canonical representation based on binary decision diagrams and introduce operators to manipulate the developed representation model. Furthermore, a…

Emerging Technologies · Computer Science 2013-03-26 Afshin Abdollahi , Mehdi Saeedi , Massoud Pedram

We determine all composition-closed equational classes of Boolean functions. These classes provide a natural generalization of clones and iterative algebras: they are closed under composition, permutation and identification…

Rings and Algebras · Mathematics 2011-02-23 Tamás Waldhauser

Reversible or information-lossless circuits have applications in digital signal processing, communication, computer graphics and cryptography. They are also a fundamental requirement in the emerging field of quantum computation. We…

Quantum Physics · Physics 2007-05-23 Vivek V. Shende , Aditya K. Prasad , Igor L. Markov , John P. Hayes

In this note we present a characterisation of all unary and binary patterns that do not only contain variables, but also reversals of their instances. These types of variables were studied recently in either more general or particular…

Formal Languages and Automata Theory · Computer Science 2015-08-20 Robert Mercaş

The paper discusses the gate complexity and the depth of reversible circuits consisting of NOT, CNOT and 2-CNOT gates in the case, when the number of additional inputs is limited. We study Shannon's gate complexity function $L(n, q)$ and…

Computational Complexity · Computer Science 2017-03-28 Dmitry V. Zakablukov

For the whole class of linear term rewriting systems, we define \emph{bottom-up rewriting} which is a restriction of the usual notion of rewriting. We show that bottom-up rewriting effectively inverse-preserves recognizability and analyze…

Formal Languages and Automata Theory · Computer Science 2013-08-01 Irene Durand , Geraud Senizergues

Usual math sets have special types: countable, compact, open, occasionally Borel, rarely projective, etc. Each such set is described by a single Set Theory formula with parameters unrelated to other formulas. Exotic expressions involving…

Logic in Computer Science · Computer Science 2026-04-01 Leonid A. Levin

We present two ways in which an infinite universal alphabet may be generated using a novel rewrite system that conserves zero (a special character of the alphabet and the symbol for that character) at every step. The recursive method…

Other Computer Science · Computer Science 2007-05-23 Peter Rowlands , Bernard Diaz

We extend the circuit model of quantum computation so that the wiring between gates is soft-coded within registers inside the gates. The addresses in these registers can be manipulated and put into superpositions. This aims at capturing…

Quantum Physics · Physics 2025-12-09 Pablo Arrighi , Christopher Cedzich , Marin Costes , Ulysse Rémond , Benoît Valiron

Various specifiable combinatorial structures, with d extensive parameters, can be exactly sampled both by the recursive method, with linear arithmetic complexity if a heavy preprocessing is performed, or by the Boltzmann method, with…

Data Structures and Algorithms · Computer Science 2013-07-09 Frederique Bassino , Andrea Sportiello

We introduce a sorting machine consisting of $k+1$ stacks in series: the first $k$ stacks can only contain elements in decreasing order from top to bottom, while the last one has the opposite restriction. This device generalizes \cite{SM},…

Data Structures and Algorithms · Computer Science 2019-10-10 Giulio Cerbai , Lapo Cioni , Luca Ferrari

A tree ${\mathbb T} =\langle T\leq \rangle$ is reversible iff there is no order $\preccurlyeq \;\varsubsetneq \;\leq $ such that ${\mathbb T} \cong \langle T ,\preccurlyeq\rangle$. Using a characterization of reversibility via back and…

Logic · Mathematics 2023-10-31 Miloš S. Kurilić

We prove for residually finite groups the following long standing conjecture: the number of twisted conjugacy classes of an automorphism of a finitely generated group is equal (if it is finite) to the number of finite dimensional…

Group Theory · Mathematics 2012-05-01 Alexander Fel'shtyn , Evgenij Troitsky

In this paper, we consider a question of sum-keeping about a multiplicative subsemigroup and its generator subsets in a semiring, and develop some elementary (collapse) process of the sum-keeping retraction through subsets until one minimal…

Number Theory · Mathematics 2025-04-04 Derong Qiu

We study skew-tolerant Gray codes, which are Gray codes in which changes in consecutive codewords occur in adjacent positions. We present the first construction of asymptotically non-vanishing skew-tolerant Gray codes, offering an…

Information Theory · Computer Science 2024-11-14 Gabriel Sac Himelfarb , Moshe Schwartz

The reversible logic can be used in various research areas, e.g. quantum computation, cryptography and signal processing. In the paper we study reversible logic circuits with additional inputs, which consist of NOT, CNOT and…

Computational Complexity · Computer Science 2016-03-22 Dmitry V. Zakablukov
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