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This paper presents two new augmented flexible (AF)-Krylov subspace methods, AF-GMRES and AF-LSQR, to compute solutions of large-scale linear discrete ill-posed problems that can be modeled as the sum of two independent random variables,…

Numerical Analysis · Mathematics 2023-10-10 Malena Sabate Landman , Jiahua Jiang , Jianru Zhang , Wuwei Ren

This paper discusses parGeMSLR, a C++/MPI software library for the solution of sparse systems of linear algebraic equations via preconditioned Krylov subspace methods in distributed-memory computing environments. The preconditioner…

Mathematical Software · Computer Science 2022-05-09 Tianshi Xu , Vassilis Kalantzis , Ruipeng Li , Yuanzhe Xi , Geoffrey Dillon , Yousef Saad

In this paper we present an efficient active-set method for the solution of convex quadratic programming problems with general piecewise-linear terms in the objective, with applications to sparse approximations and risk-minimization. The…

Optimization and Control · Mathematics 2024-05-08 Spyridon Pougkakiotis , Jacek Gondzio , Dionysis Kalogerias

Efficient solutions of large-scale, ill-conditioned and indefinite algebraic equations are ubiquitously needed in numerous computational fields, including multiphysics simulations, machine learning, and data science. Because of their…

Mathematical Software · Computer Science 2026-05-25 Xiaoye Sherry Li , Yang Liu

Large scale graph optimization problems arise in many fields. This paper presents an extensible, high performance framework (named OpenGraphGym-MG) that uses deep reinforcement learning and graph embedding to solve large graph optimization…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-06-25 Weijian Zheng , Dali Wang , Fengguang Song

Large-language models (LLMs) are rapidly being applied to radiology, enabling automated image interpretation and report generation tasks. Their deployment in clinical practice requires both high diagnostic accuracy and low inference…

Tissues and Organs · Quantitative Biology 2025-11-11 Jyun-Ping Kao

Sparse Matrix-Matrix Multiplication (SpMM) has served as fundamental components in various domains. Many previous studies exploit GPUs for SpMM acceleration because GPUs provide high bandwidth and parallelism. We point out that a static…

Hardware Architecture · Computer Science 2022-02-18 Guohao Dai , Guyue Huang , Shang Yang , Zhongming Yu , Hengrui Zhang , Yufei Ding , Yuan Xie , Huazhong Yang , Yu Wang

The current paper reports on the implementation of a numerical solver on the Graphic Processing Units (GPU) to model reactive gas mixture with detailed chemical kinetics. The solver incorporates high-order finite volume methods for solving…

Fluid Dynamics · Physics 2011-10-25 H. P. Le , J. -L. Cambier

Among randomized numerical linear algebra strategies, so-called sketching procedures are emerging as effective reduction means to accelerate the computation of Krylov subspace methods for, e.g., the solution of linear systems, eigenvalue…

Numerical Analysis · Mathematics 2024-08-02 Davide Palitta , Marcel Schweitzer , Valeria Simoncini

We present a variant of the s-step Preconditioned Conjugate Gradient (PCG) method that combines a Chebyshev-stabilized Krylov basis with a Forward Gauss-Seidel (FGS) iteration for the solution of the reduced Gram systems. In s-step…

Numerical Analysis · Mathematics 2026-03-30 Pasqua D'Ambra , Massimo Bernaschi , Mauro G. Carrozzo , Stephen Thomas

We design and implement a parallel algebraic multigrid method for isotropic graph Laplacian problems on multicore Graphical Processing Units (GPUs). The proposed AMG method is based on the aggregation framework. The setup phase of the…

Numerical Analysis · Mathematics 2013-02-12 James Brannick , Yao Chen , Xiaozhe Hu , Ludmil Zikatanov

Sparse matrix vector multiplication (SpMV) is an important kernel in scientific and engineering applications. The previous optimizations are sparse matrix format specific and expose the choice of the best format to application programmers.…

Mathematical Software · Computer Science 2012-10-10 Jiajia Li , Xiuxia Zhang , Guangming Tan , Mingyu Chen

The numerical simulation of structural mechanics applications via finite elements usually requires the solution of large-size and ill-conditioned linear systems, especially when accurate results are sought for derived variables interpolated…

Numerical Analysis · Mathematics 2019-06-26 Andrea Franceschini , Victor A. Paludetto Magri , Gianluca Mazzucco , Nicolò Spiezia , Carlo Janna

In this paper we present an active-set method for the solution of $\ell_1$-regularized convex quadratic optimization problems. It is derived by combining a proximal method of multipliers (PMM) strategy with a standard semismooth Newton…

Optimization and Control · Mathematics 2023-03-01 Spyridon Pougkakiotis , Jacek Gondzio , Dionysios S. Kalogerias

Interior point methods are widely used for different types of mathematical optimization problems. Many implementations of interior point methods in use today rely on direct linear solvers to solve systems of equations in each iteration. The…

Optimization and Control · Mathematics 2024-02-27 Felix Liu , Albin Fredriksson , Stefano Markidis

We describe an implementation of compressible inviscid fluid solvers with block-structured adaptive mesh refinement on Graphics Processing Units using NVIDIA's CUDA. We show that a class of high resolution shock capturing schemes can be…

Cosmology and Nongalactic Astrophysics · Physics 2014-11-20 Peng Wang , Tom Abel , Ralf Kaehler

An implementation of GMRES with multiple preconditioners (MPGMRES) is proposed for solving shifted linear systems with shift-and-invert preconditioners. With this type of preconditioner, the Krylov subspace can be built without requiring…

Numerical Analysis · Mathematics 2016-03-31 Tania Bakhos , Peter Kitanidis , Scott Ladenheim , Arvind K. Saibaba , Daniel Szyld

Algebraic Multigrid (AMG) methods are often robust and effective solvers for solving the large and sparse linear systems that arise from discretized PDEs and other problems, relying on heuristic graph algorithms to achieve their…

Numerical Analysis · Mathematics 2023-08-23 Tareq Zaman , Nicolas Nytko , Ali Taghibakhshi , Scott MacLachlan , Luke Olson , Matthew West

Sparse matrix-vector multiplication (SpMV) is one of the most important kernels in high-performance computing (HPC), yet SpMV normally suffers from ill performance on many devices. Due to ill performance, SpMV normally requires special care…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-09 Phillip Allen Lane , Joshua Dennis Booth

In this paper, we propose an optimization selection methodology for the ubiquitous sparse matrix-vector multiplication (SpMV) kernel. We propose two models that attempt to identify the major performance bottleneck of the kernel for every…

Performance · Computer Science 2016-01-12 Athena Elafrou , Georgios Goumas , Nectarios Koziris