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Reproducibility, traceability, and transparency in testing cyber-physical energy systems are crucial for scientific advancement and cross-laboratory collaboration. Current experimentation and test documentation practices lack formal…

Systems and Control · Electrical Eng. & Systems 2026-04-22 Kai Heussen , Jawad Kazmi , Narges Mehran , Artjoms Obushevs , Terence O'Donnell , Thomas I. Strasser

In order to increase the value of scientific datasets and improve research outcomes, it is important that only trustworthy data is used. This paper presents mechanisms by which scientists and the organisations they represent can certify the…

Cryptography and Security · Computer Science 2020-04-07 Iain Barclay , Swapna Radha , Alun Preece , Ian Taylor , Jarek Nabrzyski

Citation parsing is fundamental for search engines within academia and the protection of intellectual property. Meticulous extraction is further needed when evaluating the similarity of documents and calculating their citation impact.…

Digital Libraries · Computer Science 2018-05-23 Niall Martin Ryan

We describe a novel dataset for the automated recognition of named taxonomic and other entities relevant to the association of viruses with their hosts. We further describe some initial results using pre-trained models on the named-entity…

Computation and Language · Computer Science 2023-05-24 Rasha Alshawi , Atriya Sen , Nathan S. Upham , Beckett Sterner

The extraction of variable definitions from scientific and technical papers is essential for understanding these documents. However, the characteristics of variable definitions, such as the length and the words that make up the definition,…

Computation and Language · Computer Science 2024-12-06 Kotaro Nagayama , Shota Kato , Manabu Kano

Ensuring the reproducibility of scientific work is crucial as it allows the consistent verification of scientific claims and facilitates the advancement of knowledge by providing a reliable foundation for future research. However,…

Software Engineering · Computer Science 2025-04-14 Lázaro Costa , Susana Barbosa , Jácome Cunha

Reproducibility remains a significant challenge in machine learning (ML) for healthcare. Datasets, model pipelines, and even task or cohort definitions are often private in this field, leading to a significant barrier in sharing, iterating,…

Machine Learning · Computer Science 2025-03-04 Justin Xu , Jack Gallifant , Alistair E. W. Johnson , Matthew B. A. McDermott

A citation is a well-established mechanism for connecting scientific artifacts. Citation networks are used by citation analysis for a variety of reasons, prominently to give credit to scientists' work. However, because of current citation…

Information Retrieval · Computer Science 2020-01-17 Tong Zeng , Longfeng Wu , Sarah Bratt , Daniel E. Acuna

The global output of academic publications exceeds 5 million articles per year, making it difficult for humans to keep up with even a tiny fraction of scientific output. We need methods to navigate and interpret the artifacts -- texts,…

Information Retrieval · Computer Science 2024-11-25 Chunwei Liu , Enrique Noriega-Atala , Adarsh Pyarelal , Clayton T Morrison , Mike Cafarella

Literature analysis facilitates researchers to acquire a good understanding of the development of science and technology. The traditional literature analysis focuses largely on the literature metadata such as topics, authors, abstracts,…

Artificial Intelligence · Computer Science 2021-01-29 Linlin Hou , Ji Zhang , Ou Wu , Ting Yu , Zhen Wang , Zhao Li , Jianliang Gao , Yingchun Ye , Rujing Yao

Purpose. The increasing emphasis on data quantity in research infrastructures has highlighted the need for equally robust mechanisms ensuring data quality, particularly in bibliographic and citation datasets. This paper addresses the…

Digital Libraries · Computer Science 2025-04-17 Ivan Heibi , Silvio Peroni , Elia Rizzetto

Process patterns represent well-structured and successful recurring activities of Software Development Methodologies. They are able to form a library of reusable building blocks that can be utilized in Situational Method Engineering for…

Software Engineering · Computer Science 2020-05-12 Mahdi Fahmideh , Fereidoon Shams

Machine-learned interatomic potentials have transformed computational research in the physical sciences. Recent atomistic `foundation' models have changed the field yet again: trained on many different chemical elements and domains, these…

For data-centric systems, provenance tracking is particularly important when the system is open and decentralised, such as the Web of Linked Data. In this paper, a concise but expressive calculus which models data updates is presented. The…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-08-24 Gabriel Ciobanu , Ross Horne

Provenance has been thought of a mechanism to verify a workflow and to provide workflow reproducibility. This provenance of scientific workflows has been effectively carried out in Grid based scientific workflow systems. However, recent…

Databases · Computer Science 2015-12-01 Khawar Hasham , Kamran Munir , Richard McClatchey

The knowledge contained in academic literature is interesting to mine. Inspired by the idea of molecular markers tracing in the field of biochemistry, three named entities, namely, methods, datasets and metrics are used as AI markers for AI…

Information Retrieval · Computer Science 2020-11-04 Rujing Yao , Yingchun Ye , Ji Zhang , Shuxiao Li , Ou Wu

Integration between biology and information science benefits both fields. Many related models have been proposed, such as computational visual cognition models, computational motor control models, integrations of both and so on. In general,…

Computer Vision and Pattern Recognition · Computer Science 2016-03-28 Peijie Yin , Hong Qiao , Wei Wu , Lu Qi , YinLin Li , Shanlin Zhong , Bo Zhang

System identification is normally involved in augmenting time series data by time shifting and nonlinearisation (e.g., polynomial basis), both of which introduce redundancy in features and samples. Many research works focus on reducing…

Machine Learning · Computer Science 2025-09-05 Tingna Wang , Sikai Zhang , Mingming Song , Limin Sun

Tasks, Datasets and Evaluation Metrics are important concepts for understanding experimental scientific papers. However, most previous work on information extraction for scientific literature mainly focuses on the abstracts only, and does…

Computation and Language · Computer Science 2021-01-26 Yufang Hou , Charles Jochim , Martin Gleize , Francesca Bonin , Debasis Ganguly

Nowadays, many scientific areas share the same broad requirements of being able to deal with massive and distributed datasets while, when possible, being integrated with services and applications. In order to solve the growing gap between…

Instrumentation and Methods for Astrophysics · Physics 2011-12-06 M. Brescia , S. Cavuoti , R. D'Abrusco , O. Laurino , G. Longo