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We introduce a method to convert an ensemble of sequences of symbols into a weighted directed network whose nodes are motifs, while the directed links and their weights are defined from statistically significant co-occurences of two motifs…

Molecular Networks · Quantitative Biology 2010-10-27 Roberta Sinatra , Daniele Condorelli , Vito Latora

Many real-world complex systems, such as epidemic spreading networks and ecosystems, can be modeled as networked dynamical systems that produce multivariate time series. Learning the intrinsic dynamics from observational data is pivotal for…

Machine Learning · Computer Science 2024-12-30 Yanna Ding , Zijie Huang , Malik Magdon-Ismail , Jianxi Gao

Over the last two decades, network science has greatly advanced our understanding of how the collective behaviors of a complex system emerge from the interactions among its basic units. Multiplex networks, i.e. networks with many layers,…

A growing set of applications consider the process of network formation by using subgraphs as a tool for generating the network topology. One of the pressing research challenges is thus to be able to use these subgraphs to understand the…

Social and Information Networks · Computer Science 2019-04-11 Soumajyoti Sarkar , Hamidreza Alvari , Paulo Shakarian

How biological networks achieve robust control despite relying on imperfect, local information remains an important open question. Here, we identify thermodynamic constraints that can curtail non-equilibrium steady-state responses so…

Statistical Mechanics · Physics 2026-05-27 Carlos Floyd , Aaron R. Dinner , Suriyanarayanan Vaikuntanathan

We have developed different network approaches to analyze complex patterns of frictional interfaces (contact area developments). Network theory is a fundamental tool for the modern understanding of complex systems in which, by a simple…

General Physics · Physics 2012-01-04 H. O. Ghaffari , R. P. Young

The population activity of random networks of excitatory and inhibitory leaky integrate-and-fire (LIF) neurons has been studied extensively. In particular, a state of asynchronous activity with low firing rates and low pairwise correlations…

Neurons and Cognition · Quantitative Biology 2015-06-03 Volker Pernice , Benjamin Staude , Stefano Cardanobile , Stefan Rotter

Temporal social networks of human interactions are preponderant in understanding the fundamental patterns of human behavior. In these networks, interactions occur locally between individuals (i.e., nodes) who connect with each other at…

Physics and Society · Physics 2022-10-11 Shaunette T. Ferguson , Teruyoshi Kobayashi

Proximity networks are time-varying graphs representing the closeness among humans moving in a physical space. Their properties have been extensively studied in the past decade as they critically affect the behavior of spreading phenomena…

Physics and Society · Physics 2019-11-28 Fragkiskos Papadopoulos , Marco Antonio Rodríguez Flores

Recent studies have been using graph theoretical approaches to model complex networks (such as social, infrastructural or biological networks), and how their hardwired circuitry relates to their dynamic evolution in time. Understanding how…

Neurons and Cognition · Quantitative Biology 2015-07-17 Anca Radulescu

Networks embedded in space can display all sorts of transitions when their structure is modified. The nature of these transitions (and in some cases crossovers) can differ from the usual appearance of a giant component as observed for the…

Statistical Mechanics · Physics 2018-12-19 Marc Barthelemy

Understanding the function of network motifs in an attempt to gain insight into how their combinations create larger reaction networks that drive cellular functions, has been a longstanding pursuit of systems biology. One specific objective…

Molecular Networks · Quantitative Biology 2025-09-24 Nguyen H. N. Tran , Federico Frascoli , Andrew H. A. Clayton

This paper presents a unified framework for analyzing the input-output behavior of discrete time complex networks viewed as open systems. Importantly, we focus on systems that are inherently modeled in discrete time-such as opinion…

Physics and Society · Physics 2025-11-25 Amirhossein Nazerian , MAlbor Asllani , Melvyn Tyloo , Francesco Sorrentino

Network epidemic simulation holds the promise of enabling fine-grained understanding of epidemic behavior, beyond that which is possible with coarse-grained compartmental models. Key inputs to these epidemic simulations are the networks…

Social and Information Networks · Computer Science 2024-01-01 Omar Eldaghar , Michael W. Mahoney , David F. Gleich

Networks are widely used to represent interaction pattern among the components in complex systems. Structures of real networks from differ- ent domains may vary quite significantly. Since there is an interplay be- tween network architecture…

Quantitative Methods · Quantitative Biology 2016-05-10 Krishanu Deyasi , Shashankaditya Upadhyay , Anirban Banerjee

Network coherence generally refers to the emergence of simple aggregated dynamical behaviours, despite heterogeneity in the dynamics of the subsystems that constitute the network. In this paper, we develop a general frequency domain…

Systems and Control · Electrical Eng. & Systems 2023-02-17 Hancheng Min , Richard Pates , Enrique Mallada

Social interactions vary in time and appear to be driven by intrinsic mechanisms, which in turn shape the emerging structure of the social network. Large-scale empirical observations of social interaction structure have become possible only…

Physics and Society · Physics 2015-12-09 Guillaume Laurent , Jari Saramäki , Márton Karsai

Among all characteristics exhibited by natural and man-made networks the small-world phenomenon is surely the most relevant and popular. But despite its significance, a reliable and comparable quantification of the question `how small is a…

Physics and Society · Physics 2019-11-27 Gorka Zamora-López , Romain Brasselet

The study of temporal networks is motivated by the simple and important observation that just as network structure can affect dynamics, so can structure in time. Just as network topology can teach us about the system in question, so can its…

Physics and Society · Physics 2021-03-26 Petter Holme , Jari Saramäki

The intricate relations between elements in natural and human-made systems sustain the complex processes that shape our world, forming multiscale networks of interactions. These networks can be represented as graphs composed of nodes…

Disordered Systems and Neural Networks · Physics 2026-03-20 M. Ángeles Serrano
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