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A large variety of microorganisms produce molecules to communicate via complex signaling mechanisms such as quorum sensing and chemotaxis. The biological diversity is enormous, but synthetic inanimate colloidal microswimmers mimic…

Soft Condensed Matter · Physics 2019-10-01 Jens Grauer , Hartmut Löwen , Avraham Be'er , Benno Liebchen

Pattern formation and the mechanics of a mixture of actin filaments and myosin motors that is confined by a rigid membrane is investigated. By using a coarse-grained molecular dynamics model, we demonstrate that the competition between the…

Soft Condensed Matter · Physics 2023-04-12 Mitsusuke Tarama , Tatsuo Shibata

Collective motion of cells is common in many physiological processes, including tissue development, repair, and tumor formation. Recent experiments have shown that certain malignant cancer cells form clusters in a chemoattractant gradient,…

Biological Physics · Physics 2017-05-02 Katherine Copenhagen , Gema Malet-Engra , Weimiao Yu , Giorgio Scita , Nir Gov , Ajay Gopinathan

We numerically examine a bidisperse system of active and passive particles coupled to a resource substrate. The active particles deplete the resource at a fixed rate and move toward regions with higher resources, while all of the particles…

Soft Condensed Matter · Physics 2024-04-23 L. Varga , A. Libal , C. Reichhardt , C. J. O. Reichhardt

Active matter comprises self-driven units, such as bacteria and synthetic microswimmers, that can spontaneously form complex patterns and assemble into functional microdevices. These processes are possible thanks to the out-of-equilibrium…

Soft Condensed Matter · Physics 2021-11-17 Jens Grauer , Falko Schmidt , Jesus Pineda , Benjamin Midtvedt , Hartmut Löwen , Giovanni Volpe , Benno Liebchen

The emergence of macroscopic order and patterns is a central paradigm in systems of (self-)propelled agents, and a key component in the structuring of many biological systems.The relationships between the ordering process and the underlying…

Soft Condensed Matter · Physics 2020-12-02 Jonas Denk , Erwin Frey

Spontaneous pattern formation in living systems is driven by reaction-diffusion chemistry and active mechanics. The feedback between chemical and mechanical forces is often essential to robust pattern formation, yet it remains poorly…

Soft Condensed Matter · Physics 2022-01-20 Clara del Junco , André Estevez-Torres , Ananyo Maitra

Colonies of bacteria grown on thin agar plate exhibit fractal patterns as a result of adaptation to their environments. The bacterial colony pattern formation is regulated crucially by chemotaxis, the movement of cells along a chemical…

Biological Physics · Physics 2013-05-24 Waipot Ngamsaad , Kannika Khompurngson

Motivated by recent experimental and theoretical work on the control of phase separation by (electro-)autocatalytic reactions, we analyze pattern formation in externally driven phase separating systems described by a generalization of the…

Chemical Physics · Physics 2023-10-03 Hongbo Zhao , Martin Z. Bazant

Phase separation in passive systems leads to uncontrolled droplet growth, limiting structural control in soft materials and cells. We identify a generic mechanism to arrest coarsening based on chemical interconversion between molecular…

Soft Condensed Matter · Physics 2026-03-19 Florian Raßhofer , Erwin Frey

We examine the interactions between actively rotating proteins moving in a membrane. Experimental evidence suggests that such rotor proteins, like the ATP synthases of the inner mitochondrial membrane, can arrange themselves into lattices.…

Soft Condensed Matter · Physics 2019-10-09 Naomi Oppenheimer , David B. Stein , Michael J. Shelley

The ability to navigate in complex, inhomogeneous environments is fundamental to survival at all length scales, giving rise to the rapid development of various subfields in bio-locomotion such as the well established concept of chemotaxis.…

Soft Condensed Matter · Physics 2020-05-06 Yuanjian Zheng , Hartmut Löwen

The field of synthetic active matter has, thus far, been led by efforts to create point-like, isolated (yet interacting) self-propelled objects (\emph{e.g.} colloids, droplets, microrobots) and understanding their collective dynamics. The…

Soft Condensed Matter · Physics 2024-08-06 Manoj Kumar , Aniruddh Murali , Arvin Gopal Subramaniam , Rajesh Singh , Shashi Thutupalli

We reveal that the mechanical pulsation of locally synchronised particles is a generic route to propagate deformation waves. We consider a model of dense repulsive particles whose activity drives periodic change in size of each individual.…

Soft Condensed Matter · Physics 2023-12-12 Yiwei Zhang , Étienne Fodor

We study by simulation the physics of two colloidal particles in a cholesteric liquid crystal with tangential order parameter alignment at the particle surface. The effective force between the pair is attractive at short range and favors…

Soft Condensed Matter · Physics 2015-03-19 J. S. Lintuvuori , K. Stratford , M. E. Cates , D. Marenduzzo

Recent experiments with self-phoretic particles at low concentrations show a pronounced dynamic clustering [I. Theurkauff \emph{et al.}, Phys.\ Rev.\ Lett.\ \textbf{108}, 268303 (2012)]. We model this situation by taking into account the…

Soft Condensed Matter · Physics 2015-06-19 Oliver Pohl , Holger Stark

Via computer simulations we study kinetics of pattern formation in a two-dimensional active matter system. Self-propulsion in our model is incorporated via the Vicsek-like activity, i.e., particles have the tendency of aligning their…

Soft Condensed Matter · Physics 2020-08-26 Saikat Chakraborty , Subir K. Das

Catalytically active Janus particles suspended in solution create gradients in the chemical composition of the solution along their surfaces, as well as along any nearby container walls. The former leads to self-phoresis, while the latter…

Soft Condensed Matter · Physics 2016-09-22 W. E. Uspal , M. N. Popescu , S. Dietrich , M. Tasinkevych

We generalize the Vicsek model to describe the collective behaviour of polar circle swimmers with local alignment interactions. While the phase transition leading to collective motion in 2D (flocking) occurs at the same interaction to noise…

Statistical Mechanics · Physics 2017-08-09 Benno Liebchen , Demian Levis

Catalytically active colloids maintain non-equilibrium conditions in which they produce and deplete chemicals and hence effectively act as sources and sinks of molecules. While individual colloids that are symmetrically coated do not…

Soft Condensed Matter · Physics 2015-06-11 Rodrigo Soto , Ramin Golestanian