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Discrete dynamic models are a powerful tool for the understanding and modeling of large biological networks. Although a lot of progress has been made in developing analysis tools for these models, there is still a need to find approaches…

Molecular Networks · Quantitative Biology 2013-06-14 Jorge G. T. Zañudo , Réka Albert

Time series classification using novel techniques has experienced a recent resurgence and growing interest from statisticians, subject-domain scientists, and decision makers in business and industry. This is primarily due to the ever…

Machine Learning · Statistics 2020-03-06 Paul A. Parker , Scott H. Holan , Nalini Ravishanker

Traditional statistical approaches primarily aim to model associations between variables, but many scientific and practical questions require causal methods instead. These approaches rely on assumptions about an underlying structure, often…

Methodology · Statistics 2025-11-26 Sjoerd Hermes , Joost van Heerwaarden , Fred van Eeuwijk , Pariya Behrouzi

Boolean networks are special types of finite state time-discrete dynamical systems. A Boolean network can be described by a function from an n-dimensional vector space over the field of two elements to itself. A fundamental problem in…

Quantitative Methods · Quantitative Biology 2013-07-03 Yi Ming Zou

Dynamical systems are used to model a variety of phenomena in which the bifurcation structure is a fundamental characteristic. Here we propose a statistical machine-learning approach to derive lowdimensional models that automatically…

Quantitative Methods · Quantitative Biology 2015-06-11 Yohei Kondo , Kunihiko Kaneko , Shuji Ishihara

The coupled problems of selecting control nodes and designing control actions for nonlinear network dynamics are fundamental scientific problems with applications in many diverse fields. These problems are thoroughly studied for linear…

Systems and Control · Electrical Eng. & Systems 2020-08-25 Aleksandar Haber , Sebastian A. Nugroho , Patricio Torres , Ahmad F. Taha

I briefly survey several fascinating topics in networks and nonlinearity. I highlight a few methods and ideas, including several of personal interest, that I anticipate to be especially important during the next several years. These topics…

Social and Information Networks · Computer Science 2019-11-13 Mason A. Porter

Noise is usually regarded as adversarial to extract the effective dynamics from time series, such that the conventional data-driven approaches usually aim at learning the dynamics by mitigating the noisy effect. However, noise can have a…

Adaptation and Self-Organizing Systems · Physics 2023-09-12 Zequn Lin , Zhaofan Lu , Zengru Di , Ying Tang

The aim of this paper is to rigorously study dynamics of Heterogeneously Coupled Maps (HCM). Such systems are determined by a network with heterogeneous degrees. Some nodes, called hubs, are very well connected while most nodes interact…

Dynamical Systems · Mathematics 2017-12-20 Tiago Pereira , Sebastian van Strien , Matteo Tanzi

Network science has evolved into an indispensable platform for studying complex systems. But recent research has identified limits of classical networks, where links connect pairs of nodes, to comprehensively describe group interactions.…

Physics and Society · Physics 2022-03-24 Soumen Majhi , Matjaz Perc , Dibakar Ghosh

We develop a framework to track the structure of temporal networks with a signal processing approach. The method is based on the duality between networks and signals using a multidimensional scaling technique. This enables a study of the…

Social and Information Networks · Computer Science 2015-05-13 Ronan Hamon , Pierre Borgnat , Patrick Flandrin , Céline Robardet

Large-scale recurrent networks have drawn increasing attention recently because of their capabilities in modeling a large variety of real-world phenomena and physical mechanisms. This paper studies how to identify all authentic connections…

Machine Learning · Statistics 2015-06-23 Yiyuan She , Yuejia He , Dapeng Wu

Most complex systems are nonlinear, relying on emergent behavior from interacting subsystems, often characterized by oscillatory dynamics. Collective oscillatory behavior is essential for the proper functioning of many real world systems.…

Adaptation and Self-Organizing Systems · Physics 2024-07-03 Soumen Majhi , Biswambhar Rakshit , Amit Sharma , Jürgen Kurths , Dibakar Ghosh

This paper develops a mathematical framework to study signal networks, in which nodes can be active or inactive, and their activation or deactivation is driven by external signals and the states of the nodes to which they are connected via…

Probability · Mathematics 2025-10-14 Bernd Heidergott , Frank den Hollander , Ines Lindner , Azadeh Parvaneh

For dynamical systems that can be modelled as asymptotically stable linear systems forced by Gaussian noise, this paper develops methods to infer or estimate their modes from observations in real time. The modes can be real or complex. For…

Machine Learning · Statistics 2019-10-30 Robert S. MacKay

The classical notions of structural controllability and structural observability are receiving increasing attention in Network Science, since they provide a mathematical basis to answer how the network structure of a dynamic system affects…

Systems and Control · Computer Science 2018-12-13 Marco Tulio Angulo , Andrea Aparicio , Claude H. Moog

Higher-order network analysis uses the ideas of hypergraphs, simplicial complexes, multilinear and tensor algebra, and more, to study complex systems. These are by now well established mathematical abstractions. What's new is that the ideas…

Social and Information Networks · Computer Science 2021-03-10 Austin R. Benson , David F. Gleich , Desmond J. Higham

Chaos presents complex dynamics arising from nonlinearity and a sensitivity to initial states. These characteristics suggest a depth of expressivity that underscores their potential for advanced computational applications. However,…

Neural and Evolutionary Computing · Computer Science 2024-06-06 Shuhong Liu , Nozomi Akashi , Qingyao Huang , Yasuo Kuniyoshi , Kohei Nakajima

It is an increasingly important problem to study conditions on the structure of a network that guarantee a given behavior for its underlying dynamical system. In this paper we report that a Boolean network may fall within the chaotic…

Molecular Networks · Quantitative Biology 2008-11-04 Winfried Just , German Enciso

With the constant increase of the number of autonomous vehicles and connected objects, tools to understand and reproduce their mobility models are required. We focus on chaotic dynamics and review their applications in the design of…

Multiagent Systems · Computer Science 2023-03-30 Martin Rosalie , Serge Chaumette