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We have performed extensive simulations of random sequential adsorption and diffusion of $k$-mers, up to $k=5$ in two dimensions with particular attention to the case $k=2$. We focus on the behavior of the coverage and of vacancy dynamics…

Statistical Mechanics · Physics 2009-11-07 C. Fusco , P. Gallo , A. Petri , M. Rovere

Diffusion model-based approaches recently achieved re-markable success in MRI reconstruction, but integration into clinical routine remains challenging due to its time-consuming convergence. This phenomenon is partic-ularly notable when…

Image and Video Processing · Electrical Eng. & Systems 2024-11-07 Yu Guan , Qinrong Cai , Wei Li , Qiuyun Fan , Dong Liang , Qiegen Liu

We consider star polymers, consisting of two different polymer species, in a solvent subject to quenched correlated structural obstacles. We assume that the disorder is correlated with a power-law decay of the pair correlation function…

Soft Condensed Matter · Physics 2011-01-17 Viktoria Blavatska , Christian von Ferber , Yurij Holovatch

We consider a mixture of one neutral and two oppositely charged types of molecules confined to a surface. Using analytical techniques and molecular dynamics simulations, we construct the phase diagram of the system and exhibit the…

Soft Condensed Matter · Physics 2009-11-11 Sharon M. Loverde , Francisco Solis , Monica Olvera de la Cruz

We present several ordering mechanisms in diblock copolymers. For temperatures above the order-disorder temperature and in the weak segregation regime, a linear response theory is presented which gives the polymer density in the vicinity of…

Soft Condensed Matter · Physics 2007-05-23 Yoav Tsori , David Andelman

We study nonlinear stability of spatially homogeneous oscillations in reaction-diffusion systems. Assuming absence of unstable linear modes and linear diffusive behavior for the neutral phase, we prove that spatially localized perturbations…

Analysis of PDEs · Mathematics 2008-07-01 Thierry Gallay , Arnd Scheel

We study the dynamics of the quantum phase distribution associated with the reduced density matrix of a system for a number of situations of practical importance, as the system evolves under the influence of its environment, interacting via…

Quantum Physics · Physics 2009-11-13 Subhashish Banerjee , R. Srikanth

Lateral microsegregation in a monolayer of a binary mixture of particles or macromolecules is studied by MD simulations in a generic model with the interacting potentials inspired by effective interactions in biological or soft-matter…

Soft Condensed Matter · Physics 2025-05-26 M. Litniewski , W. T. Gozdz nd A. Ciach

Specialized Monte Carlo simulation techniques and moment free energy method calculations, capable of treating fractionation exactly, are deployed to study the crystalline phase behaviour of an assembly of spherical particles described by a…

Statistical Mechanics · Physics 2011-03-25 Peter Sollich , Nigel B. Wilding

Recent studies have revealed reentrant localization transitions in quasi-periodic one-dimensional lattices, where the competition between dimerized hopping and staggered disorder plays a central role. Yet the extent to which such reentrant…

Disordered Systems and Neural Networks · Physics 2025-09-30 Pei-Jie Chang , Dong Ruan , Gui-Lu Long

Kuramoto and Battogtokh [Nonlinear Phenom. Complex Syst. 5, 380 (2002)] discovered chimera states represented by stable coexisting synchrony and asynchrony domains in a lattice of coupled oscillators. After reformulation in terms of local…

Pattern Formation and Solitons · Physics 2017-02-01 L. A. Smirnov , G. V. Osipov , A. Pikovsky

The instability of mixing in the Kuramoto model of coupled phase oscillators is the key to understanding a range of spatiotemporal patterns, which feature prominently in collective dynamics of systems ranging from neuronal networks, to…

Chaotic Dynamics · Physics 2022-02-23 Georgi S. Medvedev , Matthew S. Mizuhara

Conformation-dependent design of polymer sequences can be considered as a tool to control macromolecular self-assembly. We consider the monomer unit sequences created via the modification of polymers in a homogeneous melt in accordance with…

Soft Condensed Matter · Physics 2021-07-07 Elena N. Govorun , Ruslan M. Shupanov , Sophia A. Pavlenko , Alexei R. Khokhlov

Diffusion of symmetric diblock copolymer chains in macroscopically oriented lamellar block copolymers are studied in a molecular dynamics simulation. Results for diffusion constant both parallel $D_\parallel$ and perpendicular $D_\perp$ to…

Soft Condensed Matter · Physics 2008-02-03 Michael Murat , Gary S. Grest , Kurt Kremer

We present a condition that guarantees spatially uniformity in the solution trajectories of a diffusively-coupled compartmental ODE model, where each compartment represents a spatial domain of components interconnected through diffusion…

Dynamical Systems · Mathematics 2012-08-22 S. Yusef Shafi

The dynamics of microphase separation and the orientation of lamellae in diblock copolymers is investigated in terms of a mean-field model. The formation of lamellar structures and their stable states are explored and it is shown that…

Soft Condensed Matter · Physics 2015-06-15 Vanessa Weith , Alexei Krekhov , Walter Zimmermann

Many biological processes are supported by special molecules, called motor proteins or molecular motors, that transport cellular cargoes along linear protein filaments and can reversibly associate to their tracks. Stimulated by these…

Statistical Mechanics · Physics 2021-11-17 Akriti Jindal , Anatoly B. Kolomeisky , Arvind Kumar Gupta

A useful concept for finding numerically the dominant correlations of a given ground state in an interacting quantum lattice system in an unbiased way is the correlation density matrix. For two disjoint, separated clusters, it is defined to…

Strongly Correlated Electrons · Physics 2015-05-14 W. Münder , A. Weichselbaum , A. Holzner , J. von Delft , C. L. Henley

We develop a density matrix renormalization group (DMRG) algorithm for constrained quantum lattice models that successfully {\it{implements the local constraints as symmetries in the contraction of the matrix product states and matrix…

Strongly Correlated Electrons · Physics 2025-08-11 Ting-Tung Wang , Xiaoxue Ran , Zi Yang Meng

We present the analysis of the slowing down exhibited by stochastic dynamics of a ring-exchange model on a square lattice, by means of numerical simulations. We find the preservation of coarse-grained memory of initial state of density-wave…

Quantum Physics · Physics 2023-04-18 Pranay Patil , Markus Heyl , Fabien Alet