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Related papers: Does Antibiotic Resistance Evolve in Hospitals?

200 papers

One of the most challenging problems in microbiology is to understand how a small fraction of microbes that resists killing by antibiotics can emerge in a population of genetically identical cells, the phenomenon known as persistence or…

Subcellular Processes · Quantitative Biology 2015-06-17 Andrea Rocco , Andrzej M. Kierzek , Johnjoe McFadden

Can we understand and predict the evolutionary pathways by which bacteria acquire multi-drug resistance (MDR)? These questions have substantial potential impact in basic biology and in applied approaches to address the global health…

Populations and Evolution · Quantitative Biology 2024-11-05 Jessica Renz , Kazeem A. Dauda , Olav N. L. Aga , Ramon Diaz-Uriarte , Iren H. Löhr , Bjørn Blomberg , Iain G. Johnston

Drug resistance remains a major problem for the treatment of HIV. Resistance can occur due to mutations that were present before treatment starts or due to mutations that occur during treatment. The relative importance of these two sources…

Populations and Evolution · Quantitative Biology 2015-06-03 Pleuni S. Pennings

Antimicrobial resistance is a silent pandemic that is being exacerbated by the uncontrolled use of antibiotics. Since the discovery of penicillin, we have been largely dependent on microbe-derived small molecules to treat bacterial…

Populations and Evolution · Quantitative Biology 2022-10-26 Hyunjin Shim

Non-genetic forms of antimicrobial drug resistance can result from cell-to-cell variability that is not encoded in the genetic material. Data from recent studies also suggest that non-genetic mechanisms can facilitate the development of…

Populations and Evolution · Quantitative Biology 2022-06-23 Kevin S. Farquhar , Samira Rasouli Koohi , Daniel A. Charlebois

The rapid emergence of antibiotic-resistant bacteria is recognized as a global healthcare crisis, undermining the efficacy of life-saving antibiotics. This crisis is driven by the improper and overuse of antibiotics, which escalates…

Machine Learning · Computer Science 2024-06-03 Simon A. Lee , Trevor Brokowski , Jeffrey N. Chiang

Nosocomial pathogens such as Methicillin-Resistant {\em Staphylococcus aureus} (MRSA) and Vancomycin-resistant {\em Enterococci} (VRE) are the cause of significant morbidity and mortality among hospital patients. It is important to be able…

Antibiotics are the wonder discoveries to combat microbes. For decades, multiple varieties of antibiotics have been used for therapeutic purposes in hospital settings and communities throughout the world. Unfortunately, bacteria have become…

Other Quantitative Biology · Quantitative Biology 2019-08-13 Fazlul MKK , Shah Samiur Rashid , Nazmul MHM , Zaidul I. S. M , Roesnita Baharudin , Aizi Nor Mazila Ramli

Bacterial populations often have complex spatial structures, which can impact their evolution. Here, we study how spatial structure affects the evolution of antibiotic resistance in a bacterial population. We consider a minimal model of…

Populations and Evolution · Quantitative Biology 2024-12-23 Cecilia Fruet , Ella Linxia Müller , Claude Loverdo , Anne-Florence Bitbol

Nosocomial infections place a substantial burden on health care systems and represent a major issue in current public health, requiring notable efforts for its prevention. Understanding the dynamics of infection transmission in a hospital…

Quantitative Methods · Quantitative Biology 2011-04-14 L. Isella , M. Romano , A. Barrat , C. Cattuto , V. Colizza , W. Van den Broeck , F. Gesualdo , E. Pandolfi , L. Ravà , C. Rizzo , A. E. Tozzi

The lack of rapid antibiotic susceptibility tests adversely affects the treatment of bacterial infections and contributes to increased prevalence of multidrug resistant bacteria. Here, we describe an all-electrical approach that allows for…

Applied Physics · Physics 2020-05-06 Yichao Yang , Kalpana Gupta , Kamil L. Ekinci

We show that a bacteria and bacteriophage system with either a perfectly nested or a one-to-one infection network is permanent, a.k.a uniformly persistent, provided that bacteria that are superior competitors for nutrient devote the least…

Populations and Evolution · Quantitative Biology 2015-05-29 Daniel A. Korytowski , Hal L. Smith

Whether evolution can be predicted is a key question in evolutionary biology. Here we set out to better understand the repeatability of evolution. We explored experimentally the effect of mutation supply and the strength of selective…

Populations and Evolution · Quantitative Biology 2017-09-13 Thomas van Dijk , Sungmin Hwang , Joachim Krug , J. Arjan G. M. de Visser , Mark P. Zwart

Ordinary differential equation (ODE) models used in mathematical epidemiology assume explicitly or implicitly large populations. For the study of infections in a hospital this is an extremely restrictive assumption as typically a hospital…

Populations and Evolution · Quantitative Biology 2023-08-21 Fabio A. C. C. Chalub , Antonio Gómez-Corral , Martín López-García , Fátima Palacios-Rodríguez

Antibiotic resistance is a major threat to global health. It emerges in multispecies microbial communities under antibiotic exposure. This makes antibiotic spectrum -- a drug's distribution of effects across species -- a potential key…

Populations and Evolution · Quantitative Biology 2026-04-21 Magnus Aspenberg , Erik Andreas Martens , Kristofer Wollein Waldetoft

Drug gradients are believed to play an important role in the evolution of bacteria resistant to antibiotics and tumors resistant to anti-cancer drugs. We use a statistical physics model to study the evolution of a population of malignant…

Populations and Evolution · Quantitative Biology 2015-06-04 Philip Greulich , Bartlomiej Waclaw , Rosalind J. Allen

We introduce and discuss a kinetic framework describing the time evolution of the statistical distributions of a population divided into the compartments of susceptible, infectious, recovered, and resistant in the presence of a microbial…

Populations and Evolution · Quantitative Biology 2026-05-07 Marco Menale , Giuseppe Toscani , Mattia Zanella

By challenging E. coli with sublethal norfloxacin for 10 days, Henry Lee and James Collins suggests the bacterial altruism leads to the population-wide resistance. By detailedly analyzing experiment data, we suggest that bacterial…

Populations and Evolution · Quantitative Biology 2017-12-25 Shilian Xu , Jiaru Yang , Chong Yin

New combinations of existing antibiotics are being investigated to combat bacterial resilience. This requires detection technologies with reasonable cost, accuracy, resolution, and throughput. Here, we present a multi -drug screening…

Signal Processing · Electrical Eng. & Systems 2022-05-25 Taejoon Kong , Nicholas Backes , Gregory Phillips , Santosh Pandey

Diseases caused by bacteria have been a threat to human civilisation for centuries. Despite the availability of numerous antibacterial drugs today, bacterial diseases continue to pose life-threatening challenges. The credit for this goes to…

Computational Physics · Physics 2026-05-13 Pritish Joshi , Abhishek Bera , Niladri Patra