Related papers: Definability equals recognizability for graphs of …
Deciding whether there is a single tree -a supertree- that summarizes the evolutionary information in a collection of unrooted trees is a fundamental problem in phylogenetics. We consider two versions of this question: agreement and…
We revisit a classical paper about (even hole, triangle)-free graphs [Conforti, Cornu\'ejols, Kapoor and Vu\v skovi\'c, Triangle-free graphs that are signable without even holes, Journal of Graph Theory, 34(3), 204--220, 2000]. In fact, the…
For a model of molecular evolution to be useful for phylogenetic inference, the topology of evolutionary trees must be identifiable. That is, from a joint distribution the model predicts, it must be possible to recover the tree parameter.…
A graph is one-ended if it contains a ray (a one way infinite path) and whenever we remove a finite number of vertices from the graph then what remains has only one component which contains rays. A vertex $v$ {\em dominates} a ray in the…
A well-known result by Frick and Grohe shows that deciding FO logic on trees involves a parameter dependence that is a tower of exponentials. Though this lower bound is tight for Courcelle's theorem, it has been evaded by a series of recent…
Query evaluation on probabilistic databases is generally intractable (#P-hard). Existing dichotomy results have identified which queries are tractable (or safe), and connected them to tractable lineages. In our previous work, using…
We have been interested in graphs and realizing them as Reeb graphs of explicit real algebraic functions. The Reeb graph of a differentiable function is the quotient space of the manifold of the domain, regarded as the space consisting of…
In two recent papers by Veitch and Roy and by Borgs, Chayes, Cohn, and Holden, a new class of sparse random graph processes based on the concept of graphexes over $\sigma$-finite measure spaces has been introduced. In this paper, we…
In the setting of constructive mathematics, we suggest and study a framework for decidability of properties, which allows for finer distinctions than just "decidable, semidecidable, or undecidable". We work in homotopy type theory and use…
We prove that Graph Isomorphism and Canonization in graphs excluding a fixed graph $H$ as a minor can be solved by an algorithm working in time $f(H)\cdot n^{O(1)}$, where $f$ is some function. In other words, we show that these problems…
This work addresses the following question: Under what assumptions on the data generating process can one infer the causal graph from the joint distribution? The approach taken by conditional independence-based causal discovery methods is…
We give a constructive proof of the fact that the treewidth of a graph $G$ is bounded by a linear function of the separation number of $G$.
The overlap graphs of subtrees in a tree (SOGs) generalise many other graphs classes with set representation characterisations. The complexity of recognising SOGs in open. The complexities of recognising many subclasses of SOGs are known.…
The notion of bounded expansion captures uniform sparsity of graph classes and renders various algorithmic problems that are hard in general tractable. In particular, the model-checking problem for first-order logic is fixed-parameter…
Treewidth is arguably the most important structural graph parameter leading to algorithmically beneficial graph decompositions. Triggered by a strongly growing interest in temporal networks (graphs where edge sets change over time), we…
An orientation of a graph is semi-transitive if it contains no directed cycles and has no shortcuts. An undirected graph is semi-transitive if it can be oriented in a semi-transitive manner. The class of semi-transitive graphs includes…
It is known that any planar graph with diameter D has treewidth O(D), and this fact has been used as the basis for several planar graph algorithms. We investigate the extent to which similar relations hold in other graph families. We show…
We show that graphs generated by collapsible pushdown systems of level 2 are tree-automatic. Even if we allow epsilon-contractions and reachability predicates (with regular constraints) for pairs of configurations, the structures remain…
Structural measures of graphs, such as treewidth, are central tools in computational complexity resulting in efficient algorithms when exploiting the parameter. It is even known that modern SAT solvers work efficiently on instances of small…
The metric dimension of a graph is the minimum size of a set of vertices such that each vertex is uniquely determined by the distances to the vertices of that set. Our aim is to upper-bound the order $n$ of a graph in terms of its diameter…