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Related papers: What can topology tell us about the neural code?

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We discuss the task of reconstructing the topological map of an environment based on the sequences of locations visited by a mobile agent -- this occurs in systems neuroscience, where one runs into the task of reconstructing the global…

Quantitative Methods · Quantitative Biology 2007-12-27 Yu. Dabaghian , A. G. Cohn , L. Frank

Two major initiatives to accelerate research in the brain sciences have focused attention on developing a new generation of scientific instruments for neuroscience. These instruments will be used to record static (structural) and dynamic…

Neurons and Cognition · Quantitative Biology 2013-07-30 Thomas Dean , Biafra Ahanonu , Mainak Chowdhury , Anjali Datta , Andre Esteva , Daniel Eth , Nobie Redmon , Oleg Rumyantsev , Ysis Tarter

In this work we study the topological properties of temporal hypergraphs. Hypergraphs provide a higher dimensional generalization of a graph that is capable of capturing multi-way connections. As such, they have become an integral part of…

Computational Geometry · Computer Science 2023-02-07 Audun Myers , Cliff Joslyn , Bill Kay , Emilie Purvine , Gregory Roek , Madelyn Shapiro

An old branch of mathematics, Topology, has opened the road to the discovery of new phases of matter. A hidden topology in the energy spectrum is the key for novel conducting/insulating properties of topological matter.

Mesoscale and Nanoscale Physics · Physics 2016-07-06 Manuel Asorey

We organized a workshop on the "Present and Future Frameworks of Theoretical Neuroscience", with the support of the National Science Foundation. The objective was to identify the challenges and strategies that this field will need to tackle…

Neurons and Cognition · Quantitative Biology 2020-04-06 Horacio G. Rotstein , Fidel Santamaria

We present an algorithm for error correction in topological codes that exploits modern machine learning techniques. Our decoder is constructed from a stochastic neural network called a Boltzmann machine, of the type extensively used in deep…

Quantum Physics · Physics 2017-07-20 Giacomo Torlai , Roger G. Melko

Deciphering the underpinnings of the dynamical processes leading to information transmission, processing, and storing in the brain is a crucial challenge in neuroscience. An inspiring but speculative theoretical idea is that such dynamics…

Statistical Mechanics · Physics 2023-07-21 Guillermo B. Morales , Serena Di Santo , Miguel A. Muñoz

Programming digital devices and developing software is an important professional qualification, which contributes to employment opportunities. Despite this fact, there is a remarkable shortage in suitable human resources. In this context,…

Computers and Society · Computer Science 2021-05-25 Spyridon Doukakis , Panagiotis Vlamos

The study and understanding of human behaviour is relevant to computer science, artificial intelligence, neural computation, cognitive science, philosophy, psychology, and several other areas. Presupposing cognition as basis of behaviour,…

Connectomics and network neuroscience offer quantitative scientific frameworks for modeling and analyzing networks of structurally and functionally interacting neurons, neuronal populations, and macroscopic brain areas. This shift in…

Neurons and Cognition · Quantitative Biology 2020-10-06 Richard Betzel

Engineers learn from every design they create, building intuition that helps them quickly identify promising solutions for new problems. Topology optimization (TO) - a well-established computational method for designing structures with…

Computational Engineering, Finance, and Science · Computer Science 2025-02-05 Igor Kuszczak , Gawel Kus , Federico Bosi , Miguel A. Bessa

Research at the intersection of machine learning, programming languages, and software engineering has recently taken important steps in proposing learnable probabilistic models of source code that exploit code's abundance of patterns. In…

Software Engineering · Computer Science 2018-05-08 Miltiadis Allamanis , Earl T. Barr , Premkumar Devanbu , Charles Sutton

The proliferation of deep neural networks in various domains has seen an increased need for interpretability of these models. Preliminary work done along this line and papers that surveyed such, are focused on high-level representation…

Computation and Language · Computer Science 2022-08-17 Hassan Sajjad , Nadir Durrani , Fahim Dalvi

Neuronal network computation and computation by avalanche supporting networks are of interest to the fields of physics, computer science (computation theory as well as statistical or machine learning) and neuroscience. Here we show that…

Physics and Society · Physics 2022-04-28 Galen Wilkerson , Sotiris Moschoyiannis , Henrik Jeldtoft Jensen

The explainability of deep networks is becoming a central issue in the deep learning community. It is the same for learning on graphs, a data structure present in many real world problems. In this paper, we propose a method that is more…

Machine Learning · Computer Science 2022-07-27 Adrien Raison , Pascal Bourdon , David Helbert

The design of fluid channel structures of reactors or separators of chemical processes is key to enhancing the mass transfer processes inside the devices. However, the systematic design of channel topological structures is difficult for…

Fluid Dynamics · Physics 2025-03-07 Chenhui Kou , Yuhui Yin , Min Zhu , Shengkun Jia , Yiqing Luo , Xigang Yuana , Lu Lu

Optical imaging of the brain has expanded dramatically in the past two decades. New optics, indicators, and experimental paradigms are now enabling in-vivo imaging from the synaptic to the cortex-wide scales. To match the resulting flood of…

Image and Video Processing · Electrical Eng. & Systems 2024-02-15 Gal Mishne , Adam Charles

Systems neuroscience relies on two complementary views of neural data, characterized by single neuron tuning curves and analysis of population activity. These two perspectives combine elegantly in neural latent variable models that…

Most real-world networks are embedded in latent geometries. If a node in a network is found in the vicinity of another node in the latent geometry, the two nodes have a disproportionately high probability of being connected by a link. The…

Physics and Society · Physics 2024-06-19 Bukyoung Jhun
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