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This paper proposes a sparse Bayesian treatment of deep neural networks (DNNs) for system identification. Although DNNs show impressive approximation ability in various fields, several challenges still exist for system identification…

Systems and Control · Electrical Eng. & Systems 2022-06-02 Hongpeng Zhou , Chahine Ibrahim , Wei Xing Zheng , Wei Pan

The enormous inference cost of deep neural networks can be scaled down by network compression. Pruning is one of the predominant approaches used for deep network compression. However, existing pruning techniques have one or more of the…

Machine Learning · Computer Science 2020-10-13 Sai Aparna Aketi , Sourjya Roy , Anand Raghunathan , Kaushik Roy

Protein function prediction is a crucial task in bioinformatics, with significant implications for understanding biological processes and disease mechanisms. While the relationship between sequence and function has been extensively…

Quantitative Methods · Quantitative Biology 2024-09-04 Shania Mitra , Lei Huang , Manolis Kellis

The task of person re-identification has recently received rising attention due to the high performance achieved by new methods based on deep learning. In particular, in the context of video-based re-identification, many state-of-the-art…

Computer Vision and Pattern Recognition · Computer Science 2018-04-11 Jean-Baptiste Boin , Andre Araujo , Bernd Girod

Similarity-based image hashing represents crucial technique for visual data storage reduction and expedited image search. Conventional hashing schemes typically feed hand-crafted features into hash functions, which separates the procedures…

Computer Vision and Pattern Recognition · Computer Science 2016-08-15 Yadong Mu , Zhu Liu

Representations learned by pre-training a neural network on a large dataset are increasingly used successfully to perform a variety of downstream tasks. In this work, we take a closer look at how features are encoded in such pre-trained…

Machine Learning · Computer Science 2023-11-15 Vedant Nanda , Till Speicher , John P. Dickerson , Soheil Feizi , Krishna P. Gummadi , Adrian Weller

This paper addresses the problem of learning binary hash codes for large scale image search by proposing a novel hashing method based on deep neural network. The advantage of our deep model over previous deep model used in hashing is that…

Computer Vision and Pattern Recognition · Computer Science 2015-08-31 Thanh-Toan Do , Anh-Zung Doan , Ngai-Man Cheung

Segmenting a structural magnetic resonance imaging (MRI) scan is an important pre-processing step for analytic procedures and subsequent inferences about longitudinal tissue changes. Manual segmentation defines the current gold standard in…

Computer Vision and Pattern Recognition · Computer Science 2017-06-07 Alex Fedorov , Jeremy Johnson , Eswar Damaraju , Alexei Ozerin , Vince Calhoun , Sergey Plis

Learning fine-grained image similarity is a challenging task. It needs to capture between-class and within-class image differences. This paper proposes a deep ranking model that employs deep learning techniques to learn similarity metric…

Computer Vision and Pattern Recognition · Computer Science 2014-04-21 Jiang Wang , Yang song , Thomas Leung , Chuck Rosenberg , Jinbin Wang , James Philbin , Bo Chen , Ying Wu

In the field of pattern recognition research, the method of using deep neural networks based on improved computing hardware recently attracted attention because of their superior accuracy compared to conventional methods. Deep neural…

Computer Vision and Pattern Recognition · Computer Science 2018-09-27 Kyongsik Yun , Alexander Huyen , Thomas Lu

Accurate RNA secondary structure prediction is vital for understanding cellular regulation and disease mechanisms. Deep learning (DL) methods have surpassed traditional algorithms by predicting complex features like pseudoknots and…

Biomolecules · Quantitative Biology 2024-01-12 Frederic Runge , Jörg K. H. Franke , Daniel Fertmann , Frank Hutter

High resolution Magnetic Resonance (MR) images are desired for accurate diagnostics. In practice, image resolution is restricted by factors like hardware and processing constraints. Recently, deep learning methods have been shown to produce…

Image and Video Processing · Electrical Eng. & Systems 2020-01-08 Venkateswararao Cherukuri , Tiantong Guo , Steve. J. Schiff , Vishal Monga

DNA sequence encoding is fundamental to gene function prediction, protein synthesis, and diverse downstream biological tasks. Despite the substantial progress achieved by large-scale DNA sequence pretraining, existing studies have…

Machine Learning · Computer Science 2026-04-21 Zhijiang Tang , Jiaxin Qi , Yan Cui , Jinli Ou , Yuhua Zheng , Jianqiang Huang

Microorganisms are widely distributed in the human daily living environment. They play an essential role in environmental pollution control, disease prevention and treatment, and food and drug production. The analysis of microorganisms is…

Computer Vision and Pattern Recognition · Computer Science 2022-03-25 Jinghua Zhang , Chen Li , Yimin Yin , Jiawei Zhang , Marcin Grzegorzek

Physics-informed neural networks (PINNs) are a versatile tool in the burgeoning field of scientific machine learning for solving partial differential equations (PDEs). However, determining suitable training strategies for them is not…

Numerical Analysis · Mathematics 2026-03-09 Saad Qadeer , Panos Stinis

Sleep scoring is a necessary and time-consuming task in sleep studies. In animal models (such as mice) or in humans, automating this tedious process promises to facilitate long-term studies and to promote sleep biology as a data-driven…

Quantitative Methods · Quantitative Biology 2018-09-25 Justus T. C. Schwabedal , Daniel Sippel , Moritz D. Brandt , Stephan Bialonski

The intrinsic difficulty in adapting deep learning models to non-stationary environments limits the applicability of neural networks to real-world tasks. This issue is critical in practical supervised learning settings, such as the ones in…

Machine Learning · Computer Science 2023-06-09 Simone Marullo , Matteo Tiezzi , Marco Gori , Stefano Melacci , Tinne Tuytelaars

For protein sequence datasets, unlabeled data has greatly outpaced labeled data due to the high cost of wet-lab characterization. Recent deep-learning approaches to protein prediction have shown that pre-training on unlabeled data can yield…

Machine Learning · Computer Science 2020-12-02 Pascal Sturmfels , Jesse Vig , Ali Madani , Nazneen Fatema Rajani

We present a novel deep convolutional neural network (DCNN) system for fine-grained image classification, called a mixture of DCNNs (MixDCNN). The fine-grained image classification problem is characterised by large intra-class variations…

Computer Vision and Pattern Recognition · Computer Science 2015-12-01 ZongYuan Ge , Alex Bewley , Christopher McCool , Ben Upcroft , Peter Corke , Conrad Sanderson

Machine learning approaches have become popular for molecular modeling tasks, including molecular force fields and properties prediction. Traditional supervised learning methods suffer from scarcity of labeled data for particular tasks,…

Chemical Physics · Physics 2022-11-29 Xiang Gao , Weihao Gao , Wenzhi Xiao , Zhirui Wang , Chong Wang , Liang Xiang