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In a \emph{weighted sequence}, for every position of the sequence and every letter of the alphabet a probability of occurrence of this letter at this position is specified. Weighted sequences are commonly used to represent imprecise or…

Data Structures and Algorithms · Computer Science 2017-08-28 Carl Barton , Tomasz Kociumaka , Chang Liu , Solon P. Pissis , Jakub Radoszewski

We present an algorithm for approximating the edit distance $\operatorname{ed}(x, y)$ between two strings $x$ and $y$ in time parameterized by the degree to which one of the strings $x$ satisfies a natural pseudorandomness property. The…

Data Structures and Algorithms · Computer Science 2018-11-13 William Kuszmaul

It is often stated that human languages, as other biological systems, are shaped by cost-cutting pressures but, to what extent? Attempts to quantify the degree of optimality of languages by means of an optimality score have been scarce and…

Computation and Language · Computer Science 2022-05-11 Ramon Ferrer-i-Cancho , Carlos Gómez-Rodríguez , Juan Luis Esteban , Lluís Alemany-Puig

We present a near-linear time algorithm that approximates the edit distance between two strings within a polylogarithmic factor; specifically, for strings of length n and every fixed epsilon>0, it can compute a (log n)^O(1/epsilon)…

Data Structures and Algorithms · Computer Science 2010-05-24 Alexandr Andoni , Robert Krauthgamer , Krzysztof Onak

The Swap-Insert Correction distance from a string $S$ of length $n$ to another string $L$ of length $m\geq n$ on the alphabet $[1..d]$ is the minimum number of insertions, and swaps of pairs of adjacent symbols, converting $S$ into $L$.…

Data Structures and Algorithms · Computer Science 2015-06-30 Jérémy Barbay , Pablo Pérez-Lantero

The Word Movers Distance (WMD) measures the semantic dissimilarity between two text documents by computing the cost of optimally moving all words of a source/query document to the most similar words of a target document. Computing WMD…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-04-27 Jesmin Jahan Tithi , Fabrizio Petrini

Stochastic approximation is a foundation for many algorithms found in machine learning and optimization. It is in general slow to converge: the mean square error vanishes as $O(n^{-1})$. A deterministic counterpart known as quasi-stochastic…

Optimization and Control · Mathematics 2024-03-26 Caio Kalil Lauand , Sean Meyn

Given a stream of items each associated with a numerical value, its edit distance to monotonicity is the minimum number of items to remove so that the remaining items are non-decreasing with respect to the numerical value. The space…

Data Structures and Algorithms · Computer Science 2011-11-24 Ho-Leung Chan , Tak-Wah Lam , Lap-Kei Lee , Jiangwei Pan , Hing-Fung Ting , Qin Zhang

Indexing highly repetitive texts --- such as genomic databases, software repositories and versioned text collections --- has become an important problem since the turn of the millennium. A relevant compressibility measure for repetitive…

Data Structures and Algorithms · Computer Science 2017-07-13 Travis Gagie , Gonzalo Navarro , Nicola Prezza

It has been proven that, when normalized by $n$, the expected length of a longest common subsequence of $d$ random strings of length $n$ over an alphabet of size $\sigma$ converges to some constant that depends only on $d$ and $\sigma$.…

Data Structures and Algorithms · Computer Science 2024-07-16 George T. Heineman , Chase Miller , Daniel Reichman , Andrew Salls , Gábor Sárközy , Duncan Soiffer

The paper considers the problem of out-of-sample risk estimation under the high dimensional settings where standard techniques such as $K$-fold cross validation suffer from large biases. Motivated by the low bias of the leave-one-out cross…

Methodology · Statistics 2020-02-12 Kamiar Rahnama Rad , Arian Maleki

Given two weighted automata, we consider the problem of whether one is big-O of the other, i.e., if the weight of every finite word in the first is not greater than some constant multiple of the weight in the second. We show that the…

Formal Languages and Automata Theory · Computer Science 2023-06-22 Dmitry Chistikov , Stefan Kiefer , Andrzej S. Murawski , David Purser

Permutation pattern-avoidance is a central concept of both enumerative and extremal combinatorics. In this paper we study the effect of permutation pattern-avoidance on the complexity of optimization problems. In the context of the dynamic…

Data Structures and Algorithms · Computer Science 2025-11-25 Benjamin Aram Berendsohn , László Kozma , Michal Opler

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Data Structures and Algorithms · Computer Science 2020-01-03 Timothy M. Chan , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat

Let $W^{(n)}$ be the $n$-letter word obtained by repeating a fixed word $W$, and let $R_n$ be a random $n$-letter word over the same alphabet. We show several results about the length of the longest common subsequence (LCS) between…

Probability · Mathematics 2021-06-07 Boris Bukh , Christopher Cox

The edit distance $ed(X,Y)$ of two strings $X,Y\in \Sigma^*$ is the minimum number of character edits (insertions, deletions, and substitutions) needed to transform $X$ into $Y$. Its weighted counterpart $ed^w(X,Y)$ minimizes the total cost…

Data Structures and Algorithms · Computer Science 2025-07-04 Itai Boneh , Egor Gorbachev , Tomasz Kociumaka

An order-preserving square in a string is a fragment of the form $uv$ where $u\neq v$ and $u$ is order-isomorphic to $v$. We show that a string $w$ of length $n$ over an alphabet of size $\sigma$ contains $\mathcal{O}(\sigma n)$…

Data Structures and Algorithms · Computer Science 2023-02-03 Paweł Gawrychowski , Samah Ghazawi , Gad M. Landau

In this paper, we consider a variant of the classical algorithmic problem of checking whether a given word $v$ is a subsequence of another word $w$. More precisely, we consider the problem of deciding, given a number $p$ (defining a…

Formal Languages and Automata Theory · Computer Science 2024-09-16 Maria Kosche , Tore Koß , Florin Manea , Viktoriya Pak

Counting the number of triangles in a graph has many important applications in network analysis. Several frequently computed metrics like the clustering coefficient and the transitivity ratio need to count the number of triangles in the…

Data Structures and Algorithms · Computer Science 2013-04-24 Mostafa Haghir Chehreghani

In spoken Keyword Search, the query may contain out-of-vocabulary (OOV) words not observed when training the speech recognition system. Using subword language models (LMs) in the first-pass recognition makes it possible to recognize the OOV…

Computation and Language · Computer Science 2020-09-11 Mittul Singh , Sami Virpioja , Peter Smit , Mikko Kurimo