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Dendritic spines are small membranous structures that protrude from the neuronal dendrite. Each spine contains a synaptic contact site that may connect its parent dendrite to the axons of neighboring neurons. Dendritic spines are markedly…

Biological Physics · Physics 2015-11-02 Karsten Miermans , Remy Kusters , Casper Hoogenraad , Cornelis Storm

Neuronal circuits internally regulate electrical signaling via a host of homeostatic mechanisms. Two prominent mechanisms, synaptic scaling and structural plasticity, are believed to maintain average activity within an operating range by…

Neurons and Cognition · Quantitative Biology 2021-04-07 Saeed Aljaberi , Timothy O'Leary , Fulvio Forni

The influx of calcium ions into the dendritic spines through the N-metyl-D-aspartate (NMDA) channels is believed to be the primary trigger for various forms of synaptic plasticity. In this paper, the authors calculate analytically the mean…

Biological Physics · Physics 2009-11-10 Luk C. Yeung , Gastone C. Castellani , Harel Z. Shouval

Excitatory synaptic connections in the adult neocortex consist of multiple synaptic contacts, almost exclusively formed on dendritic spines. Changes of dendritic spine shape and volume, a correlate of synaptic strength, can be tracked in…

Neurons and Cognition · Quantitative Biology 2018-03-13 Moritz Deger , Alexander Seeholzer , Wulfram Gerstner

There is a morphodynamic component to synaptic learning by which changes in dendritic (postsynaptic) spine head size are associated with the strengthening or weakening of the synaptic connection between two neurons. The membrane shape and…

Quantitative Methods · Quantitative Biology 2026-02-27 Matthew Hur , Thomas Bartol , Padmini Rangamani , Terrence Sejnowski , Eric Mjolsness

Dendritic spines are key structural components of excitatory synapses in the brain. Given the size of dendritic spines provides a proxy for synaptic efficacy, their detection and tracking across time is important for studies of the neural…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Pamela Osuna-Vargas , Altug Kamacioglu , Dominik F. Aschauer , Petros E. Vlachos , Sercan Alipek , Jochen Triesch , Simon Rumpel , Matthias Kaschube

Actin is a key component of the cytoskeleton, which plays central roles in cell motility, division, growth, and tensile strength. To enable this wide range of transient mechanical processes and properties, networks of actin filaments…

This paper proposes a neuronal circuitry layout and synaptic plasticity principles that allow the (pyramidal) neuron to act as a "combinatorial switch". Namely, the neuron learns to be more prone to generate spikes given those combinations…

Biological Physics · Physics 2017-05-09 Marat M. Rvachev

Coupled spin evolution and tunneling together with the relaxation and decoherence effects are studied for the double quantum dot formed in a semiconductor nanowire and driven by the periodic electric field. Such system represents a model of…

Mesoscale and Nanoscale Physics · Physics 2025-02-25 D. V. Khomitsky , M. V. Bastrakova , D. S. Pashin

Strongly interacting spins underlie many intriguing phenomena and applications ranging from magnetism to quantum information processing. Interacting spins combined with motion display exotic spin transport phenomena, such as superfluidity…

Resonant parametric modulation is a major tool of studying magnetic systems. For a spin-1/2 chain in a strong magnetic field, the resulting excitations can be mapped on fermionic excitations in the Kitaev chain. We show that the response to…

Mesoscale and Nanoscale Physics · Physics 2026-05-20 Mahmoud T. Elewa , M. I. Dykman

We present an effective model for timing-dependent synaptic plasticity (STDP) in terms of two interacting traces, corresponding to the fraction of activated NMDA receptors and the Ca2+ concentration in the dendritic spine of the…

Neurons and Cognition · Quantitative Biology 2015-02-26 Rodrigo Echeveste , Claudius Gros

Nonlinear dynamical systems may be exposed to tipping points, critical thresholds at which small changes in the external inputs or in the systems parameters abruptly shift the system to an alternative state with a contrasting dynamical…

Chaotic Dynamics · Physics 2016-10-07 Everton S. Medeiros , Iberê L. Caldas , Murilo S. Baptista , Ulrike Feudel

The cytoskeleton is a model active matter system that controls diverse cellular processes from division to motility. While both active actomyosin dynamics and actin-microtubule interactions are key to the cytoskeleton's versatility and…

We use inelastic neutron scattering to study acoustic phonons and spin excitations in single crystals of NaFeAs, a parent compound of iron pnictide superconductors. NaFeAs exhibits a tetragonal-to-orthorhombic structural transition at…

Migratory and tissue resident cells exhibit highly branched morphologies to perform their function and to adapt to the microenvironment. Immune cells, for example, display transient branched shapes while exploring the surrounding tissues.…

Biological Physics · Physics 2024-04-02 Jiayi Liu , Javier Boix-Campos , Jonathan E. Ron , Johan M. Kux , Nir S. Gov , Pablo J. Sáez

We investigate calcium signaling feedback through calcium-activated potassium channels of a dendritic spine by applying the immersed boundary method with electrodiffusion. We simulate the stochastic gating of such ion channels and the…

Subcellular Processes · Quantitative Biology 2020-09-28 Pilhwa Lee

A spin dynamics approach has been used to study the behavior of the magnetic spins and the electric pseudo-spins in a 1-D composite multiferroic chain with a linear magneto-electric coupling at the interface. The response is investigated…

Mesoscale and Nanoscale Physics · Physics 2015-10-01 Zidong Wang , Malcolm J. Grimson

Synaptic connections between neurons in the brain are dynamic because of continuously ongoing spine dynamics, axonal sprouting, and other processes. In fact, it was recently shown that the spontaneous synapse-autonomous component of spine…

Neurons and Cognition · Quantitative Biology 2018-01-08 David Kappel , Robert Legenstein , Stefan Habenschuss , Michael Hsieh , Wolfgang Maass

We investigate the collective dynamics of nonlinearly interacting modes in multimode photonic settings with long-range couplings. To this end, we have established a connection with the theory of spin networks. The emerging "photonic spins"…

Disordered Systems and Neural Networks · Physics 2020-08-05 Alba Ramos , Tsampikos Kottos , Boris Shapiro
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