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We consider the NP-hard Tree Containment problem that has important applications in phylogenetics. The problem asks if a given leaf-labeled network contains a subdivision of a given leaf-labeled tree. We develop a fast algorithm for the…

Computational Complexity · Computer Science 2017-02-22 Mathias Weller

We give an algorithm for finding the arboricity of a weighted, undirected graph, defined as the minimum number of spanning forests that cover all edges of the graph, in $\sqrt{n} m^{1+o(1)}$ time. This improves on the previous best bound of…

Data Structures and Algorithms · Computer Science 2025-07-22 Ruoxu Cen , Henry Fleischmann , George Z. Li , Jason Li , Debmalya Panigrahi

In this paper, we consider the minimum spanning tree problem (for short, MSTP) on an arbitrary set of $n$ points of $d$-dimensional space in $l_1$-norm. For this problem, for each fixed $d\geq 2$, there is a known algorithm of the…

Discrete Mathematics · Computer Science 2024-12-12 K. V. Kaymakov , D. S. Malyshev

We present a quantum algorithm for sampling random spanning trees from a weighted graph in $\widetilde{O}(\sqrt{mn})$ time, where $n$ and $m$ denote the number of vertices and edges, respectively. Our algorithm has sublinear runtime for…

Quantum Physics · Physics 2025-04-25 Simon Apers , Minbo Gao , Zhengfeng Ji , Chenghua Liu

The cost-distance Steiner tree problem seeks a Steiner tree that minimizes the total congestion cost plus the weighted sum of source-sink delays. This problem arises as a subroutine in timing-constrained global routing with a linear delay…

Data Structures and Algorithms · Computer Science 2025-03-07 Stephan Held , Edgar Perner

We consider the problem of augmenting an n-vertex graph embedded in a metric space, by inserting one additional edge in order to minimize the diameter of the resulting graph. We present exact algorithms for the cases when (i) the input…

Computational Geometry · Computer Science 2016-07-20 Ulrike Große , Joachim Gudmundsson , Christian Knauer , Michiel Smid , Fabian Stehn

Given two rooted, ordered, and labeled trees $P$ and $T$ the tree inclusion problem is to determine if $P$ can be obtained from $T$ by deleting nodes in $T$. This problem has recently been recognized as an important query primitive in XML…

Data Structures and Algorithms · Computer Science 2011-01-19 Philip Bille , Inge Li Goertz

It is required to find an optimal order of constructing the edges of a network so as to minimize the sum of the weighted connection times of relevant pairs of vertices. Construction can be performed anytime anywhere in the network, with a…

Data Structures and Algorithms · Computer Science 2021-04-20 Igor Averbakh

In a sequence of recent results (PODC 2015 and PODC 2016), the running time of the fastest algorithm for the \emph{minimum spanning tree (MST)} problem in the \emph{Congested Clique} model was first improved to $O(\log \log \log n)$ from…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-10-19 Sriram V. Pemmaraju , Vivek B. Sardeshmukh

We consider the tree consensus problem, an important problem in bioinformatics. Given a rooted tree $t$ and another tree $T$, one would like to incorporate compatible information from $T$ to $t$. This problem is a subproblem in the tree…

Data Structures and Algorithms · Computer Science 2020-03-09 Pongsaphol Pongsawakul

We consider the $k$-center problem in which the centers are constrained to lie on two lines. Given a set of $n$ weighted points in the plane, we want to locate up to $k$ centers on two parallel lines. We present an $O(n\log^2 n)$ time…

Computational Geometry · Computer Science 2016-04-27 Binay Bhattacharya , Sandip Das , Yuya Higashikawa , Tsunehiko Kameda , Naoki Katoh

We present an $O(n^2\log^4 n)$-time algorithm for computing the center region of a set of $n$ points in the three-dimensional Euclidean space. This improves the previously best known algorithm by Agarwal, Sharir and Welzl, which takes…

Computational Geometry · Computer Science 2019-10-29 Eunjin Oh , Hee-Kap Ahn

In this work we investigate the problem of estimating the percolation centrality of every vertex in a graph. This centrality measure quantifies the importance of each vertex in a graph going through a contagious process. It is an open…

Data Structures and Algorithms · Computer Science 2020-02-18 Alane M. de Lima , Murilo V. G. da Silva , André L. Vignatti

We study two fundamental decremental dynamic graph problems. In both problems, we need to maintain a vertex-weighted forest of size $n$ under edge deletions, weight updates, and a certain information-retrieval query. Both problems can be…

Data Structures and Algorithms · Computer Science 2026-05-08 Benjamin Aram Berendsohn , Marek Sokołowski

We present a novel approach to finding the $k$-sink on dynamic path networks with general edge capacities. Our first algorithm runs in $O(n \log n + k^2 \log^4 n)$ time, where $n$ is the number of vertices on the given path, and our second…

Data Structures and Algorithms · Computer Science 2016-09-07 Binay Bhattacharya , Mordecai J. Golin , Yuya Higashikawa , Tsunehiko Kameda , Naoki Katoh

We show that, for any graph optimization problem in which the feasible solutions can be expressed by a formula in monadic second-order logic describing sets of vertices or edges and in which the goal is to minimize the sum of the weights in…

Data Structures and Algorithms · Computer Science 2017-03-09 David Eppstein , Denis Kurz

We consider the problem of enumerating, for a given directed graph $G=(V,E)$ and a node $r\in V$, all directed spanning trees of $G$ rooted at $r$. For undirected graphs, the corresponding problem of enumerating all spanning trees has…

Data Structures and Algorithms · Computer Science 2026-03-13 Paweł Gawrychowski , Marcin Knapik

We study tensor networks as a model of arithmetic computation for evaluating multilinear maps. These capture any algorithm based on low border rank tensor decompositions, such as $O(n^{\omega+\epsilon})$ time matrix multiplication, and in…

Computational Complexity · Computer Science 2018-11-16 Per Austrin , Petteri Kaski , Kaie Kubjas

We describe two efficient on-line algorithms to simplify weighted graphs by eliminating degree-two vertices. Our algorithms are on-line in that they react to updates on the data, keeping the simplification up-to-date. The supported updates…

Data Structures and Algorithms · Computer Science 2007-05-23 Floris Geerts , Peter Revesz , Jan Van den Bussche

The {Congested Clique} is a distributed-computing model for single-hop networks with restricted bandwidth that has been very intensively studied recently. It models a network by an $n$-vertex graph in which any pair of vertices can…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-02-21 Leonid Barenboim , Victor Khazanov