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We introduce a novel harmonic analysis for functions defined on the vertices of a strongly connected directed graph of which the random walk operator is the cornerstone. As a first step, we consider the set of eigenvectors of the random…

Functional Analysis · Mathematics 2021-11-02 Harry Sevi , Gabriel Rilling , Pierre Borgnat

Score-based diffusion models in infinite-dimensional function spaces provide a mathematically principled framework for modelling function-valued data, offering key advantages such as resolution invariance and the ability to handle irregular…

Machine Learning · Computer Science 2026-05-06 James Rowbottom , Elizabeth L. Baker , Nick Huang , Ben Adcock , Carola-Bibiane Schönlieb , Alexander Denker

Effective information analysis generally boils down to properly identifying the structure or geometry of the data, which is often represented by a graph. In some applications, this structure may be partly determined by design constraints or…

Machine Learning · Computer Science 2016-11-07 Dorina Thanou , Xiaowen Dong , Daniel Kressner , Pascal Frossard

Kernel-based methods have been recently introduced for linear system identification as an alternative to parametric prediction error methods. Adopting the Bayesian perspective, the impulse response is modeled as a non-stationary Gaussian…

Optimization and Control · Mathematics 2017-03-16 Mattia Zorzi , Alessandro Chiuso

Various Graph Neural Networks (GNNs) have been successful in analyzing data in non-Euclidean spaces, however, they have limitations such as oversmoothing, i.e., information becomes excessively averaged as the number of hidden layers…

Machine Learning · Computer Science 2024-01-23 Jaeyoon Sim , Sooyeon Jeon , InJun Choi , Guorong Wu , Won Hwa Kim

Diffusion Maps framework is a kernel based method for manifold learning and data analysis that defines diffusion similarities by imposing a Markovian process on the given dataset. Analysis by this process uncovers the intrinsic geometric…

Machine Learning · Statistics 2015-11-20 Moshe Salhov , Amit Bermanis , Guy Wolf , Amir Averbuch

Standard convolutions are prevalent in image processing and deep learning, but their fixed kernels limits adaptability. Several deformation strategies of the reference kernel grid have been proposed. Yet, they lack a unified theoretical…

Computer Vision and Pattern Recognition · Computer Science 2025-07-31 Thomas Dagès , Michael Lindenbaum , Alfred M. Bruckstein

Diffusion maps are a commonly used kernel-based method for manifold learning, which can reveal intrinsic structures in data and embed them in low dimensions. However, as with most kernel methods, its implementation requires a heavy…

Machine Learning · Computer Science 2019-12-03 Scott Gigante , Jay S. Stanley , Ngan Vu , David van Dijk , Kevin Moon , Guy Wolf , Smita Krishnaswamy

Graph-based methods pervade the inference toolkits of numerous disciplines including sociology, biology, neuroscience, physics, chemistry, and engineering. A challenging problem encountered in this context pertains to determining the…

Machine Learning · Computer Science 2018-09-25 Daniel Romero , Vassilis N. Ioannidis , Georgios B. Giannakis

This paper introduces a novel graph signal processing framework for building graph-based models from classes of filtered signals. In our framework, graph-based modeling is formulated as a graph system identification problem, where the goal…

Machine Learning · Computer Science 2018-03-08 Hilmi E. Egilmez , Eduardo Pavez , Antonio Ortega

Calculus and geometry are ubiquitous in the theoretical modelling of scientific phenomena, but have historically been very challenging to apply directly to real data as statistics. Diffusion geometry is a new theory that reformulates…

Differential Geometry · Mathematics 2026-02-09 Iolo Jones , David Lanners

We propose a novel framework for combining datasets via alignment of their intrinsic geometry. This alignment can be used to fuse data originating from disparate modalities, or to correct batch effects while preserving intrinsic data…

Machine Learning · Computer Science 2020-01-31 Jay S. Stanley , Scott Gigante , Guy Wolf , Smita Krishnaswamy

The study of networks has witnessed an explosive growth over the past decades with several ground-breaking methods introduced. A particularly interesting -- and prevalent in several fields of study -- problem is that of inferring a function…

We introduce a novel formulation for geometry on discrete points. It is based on a universal differential calculus, which gives a geometric description of a discrete set by the algebra of functions. We expand this mathematical framework so…

Mathematical Physics · Physics 2020-02-11 Yuuya Takayama

The problem of graph learning concerns the construction of an explicit topological structure revealing the relationship between nodes representing data entities, which plays an increasingly important role in the success of many graph-based…

Machine Learning · Statistics 2021-10-20 Xingyue Pu , Siu Lun Chau , Xiaowen Dong , Dino Sejdinovic

We introduce a theory of local kernels, which generalize the kernels used in the standard diffusion maps construction of nonparametric modeling. We prove that evaluating a local kernel on a data set gives a discrete representation of the…

Classical Analysis and ODEs · Mathematics 2015-01-07 Tyrus Berry , Timothy Sauer

Kernels on discrete structures evaluate pairwise similarities between objects which capture semantics and inherent topology information. Existing kernels on discrete structures are only developed by topology information(such as adjacency…

Machine Learning · Computer Science 2022-11-01 Fuyang Li , Jiying Zhang , Xi Xiao , Bin Zhang , Dijun Luo

We introduce diffusion geometry as a new framework for geometric and topological data analysis. Diffusion geometry uses the Bakry-Emery $\Gamma$-calculus of Markov diffusion operators to define objects from Riemannian geometry on a wide…

Metric Geometry · Mathematics 2024-07-03 Iolo Jones

Graph diffusion models have made significant progress in learning structured graph data and have demonstrated strong potential for predictive tasks. Existing approaches typically embed node, edge, and graph-level features into a unified…

Machine Learning · Computer Science 2025-12-12 Yisen Gao , Xingcheng Fu , Qingyun Sun , Jianxin Li , Xianxian Li

Recently, the theory of diffusion maps was extended to a large class of local kernels with exponential decay which were shown to represent various Riemannian geometries on a data set sampled from a manifold embedded in Euclidean space.…

Classical Analysis and ODEs · Mathematics 2015-09-28 Tyrus Berry , John Harlim
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