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On a finite weighted graph, the dimer model is a probability measure on its dimer covers, that assigns to any cover a probability proportional to the product of the weights of its edges. For planar bipartite graphs, dimer correlations are…
Combinatorial Hopf algebras of trees exemplify the connections between operads and bialgebras. Painted trees were introduced recently as examples of how graded Hopf operads can bequeath Hopf structures upon compositions of coalgebras. We…
Tree-like tableaux are objects in bijection with alternative or permutation tableaux. They have been the subject of a fruitful combinatorial study for the past few years. In the present work, we define and study a new subclass of tree-like…
We explore several families of flip-graphs, all related to polygons or punctured polygons. In particular, we consider the topological flip-graphs of once-punctured polygons which, in turn, contain all possible geometric flip-graphs of…
Introduced by Reading, the shard intersection order of a finite Coxeter group $W$ is a lattice structure on the elements of $W$ that contains the poset of noncrossing partitions $NC(W)$ as a sublattice. Building on work of Bancroft in the…
The modular decomposition of a graph is a canonical representation of its modules. Algorithms for computing the modular decomposition of directed and undirected graphs differ significantly, with the undirected case being simpler, and…
A combinatorial neural code $\mathscr C\subseteq 2^{[n]}$ is convex if it arises as the intersection pattern of convex open subsets of $\mathbb R^d$. We relate the emerging theory of convex neural codes to the established theory of oriented…
The Malvenuto-Reutenauer algebra is a well-studied combinatorial Hopf algebra with a basis indexed by permutations. This algebra contains a wide variety of interesting sub Hopf algebras, in particular the Hopf algebra of plane binary trees…
Starting from the data of an arbor, which is a rooted tree with vertices decorated by disjoint sets, we introduce a lattice polytope and a partial order on its lattice points. We give recursive algorithms for various classical invariants of…
In this paper, we define a class of auxiliary graphs associated with simple undirected graphs. This class of auxiliary graphs is based on the set of spanning trees of the original graph and the edges constituting those spanning trees. A…
We present a braided circuit topology framework for investigating topology and structural phase transitions in aggregates of semiflexible polymers. In the conventional approach to circuit topology, which specifically applies to single…
We describe tilting modules of the deformed category O over a semisimple Lie algebra as certain sheaves on a moment graph associated to the corresponding block of category O. We prove that they map to Braden-MacPherson sheaves constructed…
In this paper we present a new version of the second author's factorization theorem for perfect matchings of symmetric graphs. We then use our result to solve four open problems of Propp on the enumeration of trimer tilings on the hexagonal…
We consider the closure space on the set of strings of a gentle algebra of finite representation type. Palu, Pilaud, and Plamondon proved that the collection of all biclosed sets of strings forms a lattice, and moreover, that this lattice…
This paper is motivated by the interplay between the Tamari lattice, J.-L. Loday's realization of the associahedron, and J.-L. Loday and M. Ronco's Hopf algebra on binary trees. We show that these constructions extend in the world of…
A rooted tree T is a poset whose Hasse diagram is a graph-theoretic tree having a unique minimal element. We study rowmotion on antichains and lower order ideals of T. Recently Elizalde, Roby, Plante and Sagan considered rowmotion on fences…
Tensor networks provide a natural language for non-invertible symmetries in general Hamiltonian lattice models. We use ZX-diagrams, which are tensor network presentations of quantum circuits, to define a non-invertible operator implementing…
In this paper, we study the combinatorics of a subcomplex of the Bloch-Kriz cycle complex [4] used to construct the category of mixed Tate motives. The algebraic cycles we consider properly contain the subalgebra of cycles that correspond…
We study the perfect matching lattice of a matching covered graph $G$, generated by the incidence vectors of its perfect matchings. Building on results of Lov\'asz and de Carvalho, Lucchesi, and Murty, we give a polynomial-time algorithm…
Building on a recent characterization of tope graphs of Complexes of Oriented Matroids (COMs), we tackle and generalize several classical problems in Oriented Matroids (OMs), Lopsided Sets (aka ample set systems), and partial cubes via…