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Principal component analysis (PCA) is a well-established method commonly used to explore and visualise data. A classical PCA model is the fixed effect model where data are generated as a fixed structure of low rank corrupted by noise. Under…

Methodology · Statistics 2013-05-13 Marie Verbanck , Julie Josse , François Husson

We outline how principal component analysis (PCA) can be applied to particle configuration data to detect a variety of phase transitions in off-lattice systems, both in and out of equilibrium. Specifically, we discuss its application to…

Computational Physics · Physics 2018-12-07 R. B. Jadrich , B. A. Lindquist , W. D. Pineros , D. Banerjee , T. M. Truskett

Probabilistic Component Latent Analysis (PLCA) is a statistical modeling method for feature extraction from non-negative data. It has been fruitfully applied to various research fields of information retrieval. However, the EM-solved…

Methodology · Statistics 2017-03-16 D. Cazau , G. Nuel

Principal component analysis is a powerful statistical system to investigate the structure and dynamics of the molecular interstellar medium, with particular emphasis on the study of turbulence, as revealed by spectroscopic imaging of…

Astrophysics of Galaxies · Physics 2015-06-16 C. M. Brunt , M. H. Heyer

Principal component analysis has been widely adopted to reduce the dimension of data while preserving the information. The quantum version of PCA (qPCA) can be used to analyze an unknown low-rank density matrix by rapidly revealing the…

Quantum Physics · Physics 2022-01-26 Zhaokai Li , Zihua Chai , Yuhang Guo , Wentao Ji , Mengqi Wang , Fazhan Shi , Ya Wang , Seth Lloyd , Jiangfeng Du

Methods for analysis of principal components in discrete data have existed for some time under various names such as grade of membership modelling, probabilistic latent semantic analysis, and genotype inference with admixture. In this paper…

Machine Learning · Computer Science 2012-07-19 Wray L. Buntine , Aleks Jakulin

Principal Component Analysis (PCA) is an important tool of dimension reduction especially when the dimension (or the number of variables) is very high. Asymptotic studies where the sample size is fixed, and the dimension grows [i.e., High…

Statistics Theory · Mathematics 2009-11-20 Sungkyu Jung , J. S. Marron

Independent component analysis (ICA) is popular in many applications, including cognitive neuroscience and signal processing. Due to computational constraints, principal component analysis is used for dimension reduction prior to ICA…

Methodology · Statistics 2017-10-03 Benjamin B. Risk , David S. Matteson , David Ruppert

We use Principal Component Analysis (PCA) to study the gas dynamics in numerical simulations of typical MCs. Our simulations account for the non-isothermal nature of the gas and include a simplified treatment of the time-dependent gas…

Solar and Stellar Astrophysics · Physics 2015-06-18 Erik Bertram , Rahul Shetty , Simon C. O. Glover , Ralf S. Klessen , Julia Roman-Duval , Christoph Federrath

In this work we introduce a new residual for normal linear models that are suitable for situations in which we are dealing with heteroskedasticity of unknown form, they are referred to by principal component analysis (PCA) residuals. These…

Methodology · Statistics 2017-09-01 Andréa V. Rocha , Evelina Shamarova , Alexandre B. Simas

This paper introduces a Projected Principal Component Analysis (Projected-PCA), which employs principal component analysis to the projected (smoothed) data matrix onto a given linear space spanned by covariates. When it applies to…

Methodology · Statistics 2016-01-18 Jianqing Fan , Yuan Liao , Weichen Wang

Principal component analysis (PCA) can be significantly limited when there is too few examples of the target data of interest. We propose a transfer learning approach to PCA (TL-PCA) where knowledge from a related source task is used in…

Machine Learning · Computer Science 2024-10-15 Sharon Hendy , Yehuda Dar

Principal component analysis (PCA) is a classical method for dimensionality reduction based on extracting the dominant eigenvectors of the sample covariance matrix. However, PCA is well known to behave poorly in the ``large $p$, small $n$''…

Statistics Theory · Mathematics 2009-08-26 Arash A. Amini , Martin J. Wainwright

Principal Component Analysis (PCA) is applied to the residuals of six widely used nuclear mass models to uncover systematic deviations and identify missing physical effects in theoretical nuclear mass predictions. By analyzing the principal…

Nuclear Theory · Physics 2026-03-03 Y. Y. Huang , X. H. Wu

A general asymptotic framework is developed for studying consis- tency properties of principal component analysis (PCA). Our frame- work includes several previously studied domains of asymptotics as special cases and allows one to…

Statistics Theory · Mathematics 2016-11-26 Dan Shen , Haipeng Shen , J. S. Marron

Principal component analysis (PCA) is often used to analyze multivariate data together with cluster analysis, which depends on the number of principal components used. It is therefore important to determine the number of significant…

Applications · Statistics 2024-09-19 Joshua C. Macdonald , Javier Blanco-Portillo , Marcus W. Feldman , Yoav Ram

A principal component analysis (PCA) of clean microcalorimeter pulse records can be a first step beyond statistically optimal linear filtering of pulses towards a fully non-linear analysis. For PCA to be practical on spectrometers with…

Data Analysis, Statistics and Probability · Physics 2020-01-08 J. W. Fowler , B. K. Alpert , Y. -I. Joe , G. C. O'Neil , D. S. Swetz , J. N. Ullom

We analyse synthetic galaxy spectra from the evolutionary models of Bruzual&Charlot and Fioc&Rocca-Volmerange using the method of Principal Component Analysis (PCA). We explore synthetic spectra with different ages, star formation histories…

Astrophysics · Physics 2009-10-30 S. Ronen , A. Aragon-Salamanca , O. Lahav

This paper focuses on the utility of various data transformation techniques, which might be under the principal component analysis (PCA) category, on exoplanet research. The first section introduces the methodological background of PCA and…

Earth and Planetary Astrophysics · Physics 2022-11-29 Güray Hatipoğlu

Traditional principal component analysis (PCA) is well known in high-dimensional data analysis, but it requires to express data by a matrix with observations to be continuous. To overcome the limitations, a new method called flexible PCA…

Methodology · Statistics 2021-08-17 Tonglin Zhang , Baijian Yang , Qianqian Song , Jing Su
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