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In the Minimum Common String Partition Problem (MCSP), we are given two strings on input, and we want to partition both into the same collection of substrings, minimizing the number of the substrings in the partition. This combinatorial…

Data Structures and Algorithms · Computer Science 2021-10-12 Miloš Chromý , Markus Sinnl

Problems in scientific computing, such as distributing large sparse matrix operations, have analogous formulations as hypergraph partitioning problems. A hypergraph is a generalization of a traditional graph wherein "hyperedges" may connect…

Data Structures and Algorithms · Computer Science 2022-06-16 Justin Sybrandt , Ruslan Shaydulin , Ilya Safro

This paper proposes a local search algorithm for a specific combinatorial optimisation problem in graph theory: the Hamiltonian Completion Problem (HCP) on undirected graphs. In this problem, the objective is to add as few edges as possible…

Discrete Mathematics · Computer Science 2020-07-03 Jorik Jooken , Pieter Leyman , Patrick De Causmaecker

This paper presents the results of an experimental study of graph partitioning. We describe a new heuristic technique, path optimization, and its application to two variations of graph partitioning: the max_cut problem and the…

Combinatorics · Mathematics 2016-09-06 Jonathan Berry , Mark Goldberg

Biclustering, also known as co-clustering or two-way clustering, simultaneously partitions the rows and columns of a data matrix to reveal submatrices with coherent patterns. Incorporating background knowledge into clustering to enhance…

Optimization and Control · Mathematics 2026-02-24 Antonio M. Sudoso

Hypergraphs allow modeling problems with multi-way high-order relationships. However, the computational cost of most existing hypergraph-based algorithms can be heavily dependent upon the input hypergraph sizes. To address the…

Machine Learning · Computer Science 2021-12-22 Ali Aghdaei , Zhiqiang Zhao , Zhuo Feng

Branch-and-bound (BnB) algorithms are widely used to solve combinatorial problems, and the performance crucially depends on its branching heuristic.In this work, we consider a typical problem of maximum common subgraph (MCS), and propose a…

Machine Learning · Computer Science 2019-05-23 Yan-li Liu , Chu-min Li , Hua Jiang , Kun He

Fixed parameter tractable algorithms for bounded treewidth are known to exist for a wide class of graph optimization problems. While most research in this area has been focused on exact algorithms, it is hard to find decompositions of…

Data Structures and Algorithms · Computer Science 2016-10-05 Thomas Bosman

Finding maximum-weight independent sets in graphs is an important NP-hard optimization problem. Given a vertex-weighted graph $G$, the task is to find a subset of pairwise non-adjacent vertices of $G$ with maximum weight. Most recently…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-10-16 Jannick Borowitz , Ernestine Großmann , Mattthias Schimek

Spectral graph bisections are a popular heuristic aimed at approximating the solution of the NP-complete graph bisection problem. This technique, however, does not always provide a robust tool for graph partitioning. Using a special class…

Numerical Analysis · Mathematics 2015-12-22 John C. Urschel , Ludmil T. Zikatanov

The crossing resolution of a non-planar drawing of a graph is the value of the minimum angle formed by any pair of crossing edges. Recent experiments have shown that the larger the crossing resolution is, the easier it is to read and…

Data Structures and Algorithms · Computer Science 2018-09-03 Michael A. Bekos , Henry Förster , Christian Geckeler , Lukas Holländer , Michael Kaufmann , Amadäus M. Spallek , Jan Splett

The decomposition of undirected graphs simplifies complex problems by breaking them into solvable subgraphs, following the philosophy of divide and conquer. This paper investigates the relationship between atom decomposition and the maximum…

Data Structures and Algorithms · Computer Science 2026-02-24 Pei Heng , Yi Sun , Jianhua Guo

Partitioning a graph into blocks of roughly equal weight while cutting only few edges is a fundamental problem in computer science with numerous practical applications. While shared-memory parallel partitioners have recently matured to…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-06-06 Peter Sanders , Daniel Seemaier

Finding a maximum cut is a fundamental task in many computational settings. Surprisingly, it has been insufficiently studied in the classic distributed settings, where vertices communicate by synchronously sending messages to their…

Data Structures and Algorithms · Computer Science 2017-07-27 Keren Censor-Hillel , Rina Levy , Hadas Shachnai

This paper presents a novel meta algorithm, Partition-Merge (PM), which takes existing centralized algorithms for graph computation and makes them distributed and faster. In a nutshell, PM divides the graph into small subgraphs using our…

Data Structures and Algorithms · Computer Science 2013-09-25 Vincent Blondel , Kyomin Jung , Pushmeet Kohli , Devavrat Shah

The Minimum Set Cover Problem (MSCP) is a classical NP-hard combinatorial optimization problem with numerous applications in science and engineering. Although a wide range of exact, approximate, and metaheuristic approaches have been…

Artificial Intelligence · Computer Science 2026-04-07 Isidora Hernández , Héctor Ferrada , Cristóbal A. Navarro

Betweenness Centrality (BC) is steadily growing in popularity as a metrics of the influence of a vertex in a graph. The BC score of a vertex is proportional to the number of all-pairs-shortest-paths passing through it. However, complete and…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-02-22 Flavio Vella , Giancarlo Carbone , Massimo Bernaschi

Partitioning graphs into blocks of roughly equal size such that few edges run between blocks is a frequently needed operation in processing graphs. Recently, size, variety, and structural complexity of these networks has grown dramatically.…

Data Structures and Algorithms · Computer Science 2018-10-16 Yaroslav Akhremtsev , Peter Sanders , Christian Schulz

Abstract notions of convexity over the vertices of a graph, and corresponding notions of halfspaces, have recently gained attention from the machine learning community. In this work we study monophonic halfspaces, a notion of graph…

Machine Learning · Computer Science 2025-07-01 Marco Bressan , Victor Chepoi , Emmanuel Esposito , Maximilian Thiessen

Scalable addressing of high dimensional constrained combinatorial optimization problems is a challenge that arises in several science and engineering disciplines. Recent work introduced novel application of graph neural networks for solving…

Optimization and Control · Mathematics 2024-05-20 Nasimeh Heydaribeni , Xinrui Zhan , Ruisi Zhang , Tina Eliassi-Rad , Farinaz Koushanfar