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We provide a numerical study of the macroscopic model of [3] derived from an agent-based model for a system of particles interacting through a dynamical network of links. Assuming that the network remodelling process is very fast, the…

In this paper, we consider a diffusive mobile molecular communication (MC) system consisting of a pair of mobile transmitter and receiver nano-machines suspended in a fluid medium, where we model the mobility of the nano-machines by…

Information Theory · Computer Science 2017-04-24 Arman Ahmadzadeh , Vahid Jamali , Robert Schober

This work introduces the particle-intensity channel (PIC) as a model for molecular communication systems and characterizes the properties of the optimal input distribution and the capacity limits for this system. In the PIC, the transmitter…

Information Theory · Computer Science 2017-05-24 Nariman Farsad , Christopher Rose , Muriel Médard , Andrea Goldsmith

Diffusive molecular communication (DMC) is one of the most promising approaches for realizing nano-scale communications in biological environments for healthcare applications. In this paper, a DMC system in biological cylindrical…

Information Theory · Computer Science 2018-11-27 Mohammad Zoofaghari , Hamidreza Arjmandi

In this paper, the impulse response for a 3-D microfluidic channel in the presence of Poiseuille flow is obtained by solving the diffusion equation in radial coordinates. Using the radial distribution, the axial distribution is then…

Emerging Technologies · Computer Science 2019-12-11 Fatih Dinc , Bayram Cevdet Akdeniz , Ali Emre Pusane , Tuna Tugcu

This paper investigates the channel impulse response (CIR), i.e., the molecule hitting rate, of a molecular communication (MC) system employing an absorbing receiver (RX) covered by multiple non overlapping receptors. In this system,…

Emerging Technologies · Computer Science 2022-04-29 Xinyu Huang , Yuting Fang , Stuart T. Johnston , Mattew Faria , Nan Yang , Robert Schober

Backscatter communication is a hot candidate for future IoT systems. It offers the possibility for connectivity with tiny amounts of energy that can be easily obtained from energy harvesting. This is possible as backscatter devices do not…

Information Theory · Computer Science 2023-06-29 Clemens Korn , Jörg Robert , Tobias Dräger

In this paper, we consider a two-hop molecular communication network consisting of one nanotransmitter, one nanoreceiver, and one nanotransceiver acting as a relay. We consider two different schemes for relaying to improve the range of…

Information Theory · Computer Science 2016-11-17 Arman Ahmadzadeh , Adam Noel , Robert Schober

In this paper, we propose adding enzymes to the propagation environment of a diffusive molecular communication system as a strategy for mitigating intersymbol interference. The enzymes form reaction intermediates with information molecules…

Information Theory · Computer Science 2014-10-17 Adam Noel , Karen C. Cheung , Robert Schober

This paper presents a stochastic analysis of the time-variant channel impulse response (CIR) of a three dimensional diffusive mobile molecular communication (MC) system where the transmitter, the absorbing receiver, and the molecules can…

Information Theory · Computer Science 2019-08-16 Trang Ngoc Cao , Arman Ahmadzadeh , Vahid Jamali , Wayan Wicke , Phee Lep Yeoh , Jamie Evans , Robert Schober

The design of biologically-inspired wireless communication systems using bacteria as the basic element of the system is initially motivated by a phenomenon called \emph{Quorum Sensing}. Due to high randomness in the individual behavior of a…

Information Theory · Computer Science 2016-11-17 Arash Einolghozati , Mohsen Sardari , Faramarz Fekri

Most diffusion based molecular channels suffer from low information capacity due to the structure of the diffusion environment. To address this issue, this paper studies the capacity of the diffusion based molecular communication by…

Information Theory · Computer Science 2020-06-25 Farhad Mirkarimi , Mahtab Mirmohseni , Masoumeh Nasiri-Kenari

Diffusion-based and neural communication are two interesting domains in molecular communication. Both of them have distinct advantages and are exploited separately in many works. However, in some cases, neural and diffusion-based ways have…

Emerging Technologies · Computer Science 2015-07-07 Peng He , Yuming Mao , Qiang Liu , Kun Yang

Translational diffusion coefficients are routinely estimated from molecular dynamics simulations. Linear fits to mean squared displacement (MSD) curves have become the de facto standard, from simple liquids to complex biomacromolecules.…

Computational Physics · Physics 2020-11-20 Jakob Tómas Bullerjahn , Sören von Bülow , Gerhard Hummer

Time course measurement of single molecules on a cell surface provides detailed information on the dynamics of the molecules, which is otherwise inaccessible. To extract the quantitative information, single particle tracking (SPT) is…

Quantitative Methods · Quantitative Biology 2016-01-06 Shunsuke Teraguchi , Yutaro Kumagai

This work presents a new multi-chemical experimental platform for molecular communication where the transmitter can release different chemicals. This platform is designed to be inexpensive and accessible, and it can be expanded to simulate…

Emerging Technologies · Computer Science 2017-04-18 Nariman Farsad , David Pan , Andrea Goldsmith

We propose and analyse a model predictive control (MPC) strategy tailored for networks of underwater agents tasked with maintaining formation while following a shared path and using acoustic communication channels. The strategy accommodates…

Optimization and Control · Mathematics 2024-10-22 Emil Wengle , Damiano Varagnolo

In the nanonetworking literature, many solutions have been suggested to enable the nanomachine-to-nanomachine communication. Among these solutions, we focus on what constitutes the basis for molecular communication paradigms --molecular…

Emerging Technologies · Computer Science 2014-10-30 Akif Cem Heren , H. Birkan Yilmaz , Chan-Byoung Chae , Tuna Tugcu

Machine learning approaches to Structure-Based Drug Design (SBDD) have proven quite fertile over the last few years. In particular, diffusion-based approaches to SBDD have shown great promise. We present a technique which expands on this…

Machine Learning · Computer Science 2024-07-01 Matan Halfon , Eyal Rozenberg , Ehud Rivlin , Daniel Freedman

Molecular Communications (MC) is a bio-inspired communication technique that uses molecules to transfer information among bio-nano devices. In this paper, we focus on the detection problem for biological MC receivers employing ligand…

Emerging Technologies · Computer Science 2021-05-13 Murat Kuscu , Ozgur B. Akan