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How many times a diffusing molecule can permeate across a membrane or be adsorbed on a substrate? We employ the encounter-based approach to find the statistics of adsorption or permeation events for molecular diffusion in a general…

Chemical Physics · Physics 2025-07-15 Denis S. Grebenkov

A model for the adsorption of a binary mixture on a one-dimensional infinite lattice with nearest neighbour cooperative effects is considered. The particles of the two species are both monomers but differ in the repulsive interaction…

Statistical Mechanics · Physics 2010-04-20 A. Prados , J. J. Brey

The diffusion of particles trapped in long narrow channels occurs predominantly in one dimension. Here, molecular dynamics simulation is used to study the inertial dynamics of two-dimensional hard disks, confined to long, narrow,…

Soft Condensed Matter · Physics 2020-02-05 Mahdi Zarif , Richard K. Bowles

In a very long Gaussian polymer on time scales shorter that the maximal relaxation time, the mean squared distance travelled by a tagged monomer grows as ~t^{1/2}. We analyze such sub-diffusive behavior in the presence of one or two…

Statistical Mechanics · Physics 2011-11-10 Yacov Kantor , Mehran Kardar

We study diffusion-controlled single-species annihilation with sparse initial conditions. In this random process, particles undergo Brownian motion, and when two particles meet, both disappear. We focus on sparse initial conditions where…

Statistical Mechanics · Physics 2016-11-23 E. Ben-Naim , P. L. Krapivsky

We introduce two discrete models of a collection of colliding particles with stored momentum and study the asymptotic growth of the mean-square displacement of an active particle. We prove that the models are superdiffusive in one dimension…

Probability · Mathematics 2020-01-08 Edward Crane , Sean Ledger , Balint Toth

In this paper we analyze the influence of transport mechanisms (diffusion and sedimentation) on the structure of monolayers of particles irreversibly adsorbed on a line. We focus our attention on the dependence of the radial distribution…

Condensed Matter · Physics 2009-10-28 Jordi Faraudo , Javier Bafaluy

Describing the diffusion of particles through crowded, confined environments with which they can interact is of considerable biological and technological interest. Under conditions where the confinement dimensions become comparable to the…

Soft Condensed Matter · Physics 2009-11-13 Mark L. Henle , Brian DiDonna , Christian D. Santangelo , Ajay Gopinathan

We study the three-dimensional structure formation when atoms are deposited onto a substrate with a decagonal quasicrystalline order. Molecular-dynamicscalculations show that the adsorbate layer consists of ordered nano-scale domains with…

Materials Science · Physics 2007-11-29 Muhittin Mungan , Yves Weisskopf , Mehmet Erbudak

Different approaches are presented to investigate diffusion from a point source in a slab delimited by two absorbing boundaries consisting of parallel infinite planes. These approaches enable to consider the effect of absorption at the…

General Physics · Physics 2007-05-23 Richard Taillet , Pierre Salati , David Maurin , Eric Pilon

We analyze the large scale structure and fluctuations of jammed packings of size disperse spheres, produced in a granular experiment as well as numerically. While the structure factor of the packings reveals no unusual behavior for small…

Statistical Mechanics · Physics 2011-06-01 Ludovic Berthier , Pinaki Chaudhuri , Corentin Coulais , Olivier Dauchot , Peter Sollich

A consolidated mathematical formulation of the spherically symmetric mass-transfer problem is presented, with the quasi-stationary approximating equations derived from a perturbation point of view for the leading-order effect. For the…

Mathematical Physics · Physics 2012-09-24 James Q. Feng

Colloidal and other granular media experience a transition to rigidity known as jamming if the fill fraction is increased beyond a critical value. The resulting jammed structures are locally disordered, bear applied loads inhomogenously,…

Soft Condensed Matter · Physics 2016-08-04 Christopher J. Burke , Timothy J. Atherton

The close packing density of log-normal and bimodal distributed, surface-adsorbed particles or discs in 2D is studied by numerical simulation. For small spread in particle size, the system orders in a polycrystalline structure of hexagonal…

Soft Condensed Matter · Physics 2012-01-27 Robert D. Groot , Simeon D. Stoyanov

Amorphous materials as diverse as foams, emulsions, colloidal suspensions and granular media can jam into a rigid, disordered state where they withstand finite shear stresses before yielding. Here we review the current understanding of the…

Soft Condensed Matter · Physics 2015-05-14 M van Hecke

It is shown that particles undergoing discrete-time jumps in 3D, starting at a distance r0 from the center of an adsorbing sphere of radius R, are captured with probability (R - c sigma)/r0 for r0 much greater than R, where c is related to…

Disordered Systems and Neural Networks · Physics 2015-05-13 Robert M. Ziff , Satya N. Majumdar , Alain Comtet

We introduce a three-dimensional model for jamming and glasses, and prove that the fraction of frozen particles is discontinuous at the directed-percolation critical density. In agreement with the accepted scenario for jamming- and…

Statistical Mechanics · Physics 2014-05-02 Antina Ghosh , Eial Teomy , Yair Shokef

We show the impact that scalar structures deformation and mixing has on the fate of plumes of waterborne contaminant transported through a chemically heterogeneous, partially adsorbing porous medium. Via pore-scale simulations, we follow…

Fluid Dynamics · Physics 2023-02-15 Dario Maggiolo , Oskar Modin , Angela Sasic Kalagasidis

Adsorption to a surface, reversible-binding, and trapping are all prevalent scenarios where particles exhibit "stickiness". Escape and first-passage times are known to be drastically affected, but detailed understanding of this phenomenon…

Statistical Mechanics · Physics 2023-12-06 Yuval Scher , Shlomi Reuveni , Denis S. Grebenkov

Here we address a fundamental issue in surface physics: the dynamics of adsorbed molecules. We study this problem when the particle's desorption is characterized by a non Markovian process, while the particle's adsorption and its motion in…

Statistical Mechanics · Physics 2009-11-10 Jorge A. Revelli , Carlos. E. Budde , Domingo Prato , Horacio S. Wio