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Machine learning approaches to Structure-Based Drug Design (SBDD) have proven quite fertile over the last few years. In particular, diffusion-based approaches to SBDD have shown great promise. We present a technique which expands on this…

Machine Learning · Computer Science 2024-07-01 Matan Halfon , Eyal Rozenberg , Ehud Rivlin , Daniel Freedman

In this letter, we derive the impulse response of the channel with a spherical absorbing receiver, a spherical reflecting boundary, and a point transmitter in molecular communication domain. By exploring the channel characteristics and…

Emerging Technologies · Computer Science 2019-12-11 Fatih Dinc , Bayram Cevdet Akdeniz , Ali Emre Pusane , Tuna Tugcu

The theory is presented for resonance interaction between two atoms in an excited configuration: one atom, the "receptor" of information (i.e. energy), adsorbed on a phospholipid surface and the other atom, the "emitter" of information…

Quantum Physics · Physics 2013-05-20 Mathias Boström , Clas Persson , Dan Huang , Barry W. Ninham , Bo E. Sernelius

We report a quantitative, analytical and numerical, comparison between two models of the interaction of a non-relativistic quantum particle with a thin time-dependent absorbing barrier. The first model represents the barrier by a set of…

Quantum Physics · Physics 2015-12-04 Maximilien Barbier , Mathieu Beau , Arseni Goussev

We present a model treating the kinetics of adsorption of soluble surface-active molecules at the interface between an aqueous solution and another fluid phase. The model accounts for both the diffusive transport inside the solution and the…

Soft Condensed Matter · Physics 2007-05-23 H. Diamant , D. Andelman

The article describes the diffusion approximation and the method of its use for evaluation of the effectiveness of active queue management (AQM) mechanisms. The presented model combines the approximation and simulation approaches. The…

Systems and Control · Electrical Eng. & Systems 2019-11-07 Dariusz Marek , Adam Domański , Joanna Domańska , Tadeusz Czachórski , Jerzy Klamka , Jakub Szyguła

This paper presents a Markov-based system model for microfluidic molecular communication (MC) channels. By discretizing the advection-diffusion dynamics, the proposed model establishes a physically consistent state-space formulation. The…

Emerging Technologies · Computer Science 2025-11-11 Ruifeng Zheng , Pengjie Zhou , Pit Hofmann , Fatima Rani , Juan A. Cabrera , Frank H. P. Fitzek

A one-dimensional model on a line of the length L is investigated, which involves particle diffusion as well as single particle annihilation. There are also creation and annihilation at the boundaries. The static and dynamical behaviors of…

Mathematical Physics · Physics 2014-03-17 Mohammad Khorrami , Amir Aghamohammadi

We initiate the study of passive environment-assisted communication via a quantum channel, modeled as a unitary interaction between the information carrying system and an environment. In this model, the environment is controlled by a…

Quantum Physics · Physics 2016-03-25 Siddharth Karumanchi , Stefano Mancini , Andreas Winter , Dong Yang

We provide a numerical study of the macroscopic model of [3] derived from an agent-based model for a system of particles interacting through a dynamical network of links. Assuming that the network remodelling process is very fast, the…

Molecular communication (MC) enables cooperation of spatially dispersed molecular robots through the feedback control mediated by diffusing signal molecules. However, conventional analysis frameworks for the MC channels mostly consider the…

Systems and Control · Electrical Eng. & Systems 2025-08-11 Taishi Kotsuka , Yutaka Hori

Molecular communications is a promising framework for the design of controlled-release drug delivery systems. Under this framework, drug carriers, diseased cells, and the channel are modeled as transmitters, absorbing receivers, and…

Diffusive molecular communication (DMC) is one of the most promising approaches for realizing nano-scale communications in biological environments for healthcare applications. In this paper, a DMC system in biological cylindrical…

Information Theory · Computer Science 2018-11-27 Mohammad Zoofaghari , Hamidreza Arjmandi

Molecular Communication via Diffusion (MCvD) is a prominent small-scale technology, which roots from the nature. With solid analytical foundations on channel response and advanced modulation techniques, molecular single-input-single-output…

Information Theory · Computer Science 2023-12-05 Gokberk Yaylali , Bayram Cevdet Akdeniz , Tuna Tugcu , Ali Emre Pusane

In diffusion-based molecular communication, information is transferred from a transmitter to a receiver using molecular carriers. The low achievable data rate is the main disadvantage of diffusion-based molecular over radio-based…

Emerging Technologies · Computer Science 2018-09-18 Tayyebeh Jahani-Nezhad , Foroogh S. Tabataba

In this paper, we consider a multi-hop molecular communication network consisting of one nanotransmitter, one nanoreceiver, and multiple nanotransceivers acting as relays. We consider three different relaying schemes to improve the range of…

Information Theory · Computer Science 2016-11-17 Arman Ahmadzadeh , Adam Noel , Robert Schober

Molecular communication (MC) enables information exchange at the nano- and microscale, with applications in areas like drug delivery and health monitoring. These event-driven scenarios often require alternatives to traditional transmission.…

Information Theory · Computer Science 2025-06-18 Yaning Zhao , Luca Miszewski , Christian Deppe , Massimiliano Pierobon

Spreading processes on top of active dynamics provide a novel theoretical framework for capturing emerging collective behavior in living systems. I consider run-and-tumble dynamics coupled with coagulation/decoagulation reactions that lead…

Statistical Mechanics · Physics 2025-05-29 Matteo Paoluzzi

Mixtures of active and passive particles are ubiquitous at the microscale. Many essential microbial processes involve interactions with dead or immotile cells or passive crowders. When passive objects are immersed in active baths, their…

Soft Condensed Matter · Physics 2026-02-24 Horacio Serna , C. Miguel Barriuso G. , Ignacio Pagonabarraga , Marco Polin , Chantal Valeriani

In this paper, a novel fluid dynamics-based approach to channel modeling, which considers liquid droplets as information carriers instead of molecules in the molecular communication (MC) channel, is proposed for practical macroscale MC…

Signal Processing · Electrical Eng. & Systems 2021-01-05 Fatih Gulec , Baris Atakan
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