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Across scientific disciplines, thresholded pairwise measures of statistical dependence between time series are taken as proxies for the interactions between the dynamical units of a network. Yet such correlation measures often fail to…

Data Analysis, Statistics and Probability · Physics 2018-02-07 Benedict J. Lünsmann , Christoph Kirst , Marc Timme

In order to take the weight of connection into consideration and to find a natural measurement of weight, we have collected papers in Econophysics and constructed a network of scientific communication to integrate idea transportation among…

Other Condensed Matter · Physics 2007-05-23 Menghui Li , Ying Fan , Jiawei Chen , Liang Gao , Zengru Di , Jinshan Wu

Synchronization phenomena on networks have attracted much attention in studies of neural, social, economic, and biological systems, yet we still lack a systematic understanding of how relative synchronizability relates to underlying network…

Social and Information Networks · Computer Science 2023-09-08 Joseph T. Lizier , Frank Bauer , Fatihcan M. Atay , Jürgen Jost

Inferring the connectivity of neural circuits from incomplete observations is a fundamental challenge in neuroscience. We present a covariance-based method for estimating the weight matrix of a recurrent neural network from sparse, partial…

Quantitative Methods · Quantitative Biology 2026-03-20 Quilee Simeon

Performing multiple experiments is common when learning internal mechanisms of complex systems. These experiments can include perturbations to parameters or external disturbances. A challenging problem is to efficiently incorporate all…

Systems and Control · Computer Science 2020-08-25 Zuogong Yue , Johan Thunberg , Wei Pan , Lennart Ljung , Jorge Goncalves

Nowadays massive amount of data are available for analysis in natural and social systems. Inferring system structures from the data, i.e., the inverse problem, has become one of the central issues in many disciplines and interdisciplinary…

Biological Physics · Physics 2015-06-22 Zhaoyang Zhang , Zhigang Zheng , Haijing Niu , Yuanyuan Mi , Si Wu , Gang Hu

Knowing brain connectivity is of great importance both in basic research and for clinical applications. We are proposing a method to infer directed connectivity from zero-lag covariances of neuronal activity recorded at multiple sites. This…

Neurons and Cognition · Quantitative Biology 2018-04-10 Jonathan Schiefer , Alexander Niederbühl , Volker Pernice , Carolin Lennartz , Pierre LeVan , Jürgen Henning , Stefan Rotter

We address the inverse problem of reconstructing both the structure and dynamics of a network from mean-field measurements, which are linear combinations of node states. This setting arises in applications where only a few aggregated…

Dynamical Systems · Mathematics 2025-11-04 Narcicegi Kiran , Tiago Pereira

While operating communication networks adaptively may improve utilization and performance, frequent adjustments also introduce an algorithmic challenge: the re-optimization of traffic engineering solutions is time-consuming and may limit…

Networking and Internet Architecture · Computer Science 2023-12-19 Monika Henzinger , Ami Paz , Stefan Schmid

We propose a conceptually novel method of reconstructing the topology of dynamical networks. By examining the correlation between the variable of one node and the derivative of another node, we derive a simple matrix equation yielding the…

Data Analysis, Statistics and Probability · Physics 2015-06-11 Zoran Levnajić

The formalism of complex networks is extensively employed to describe the dynamics of interacting agents in several applications. The features of the connections among the nodes in a network are not always provided beforehand, hence the…

Dynamical Systems · Mathematics 2017-04-12 Francesco Alderisio , Gianfranco Fiore , Mario di Bernardo

Network scientists often use complex dynamic processes to describe network contagions, but tools for fitting contagion models typically assume simple dynamics. Here, we address this gap by developing a nonparametric method to reconstruct a…

Social and Information Networks · Computer Science 2024-10-10 Nicholas W. Landry , William Thompson , Laurent Hébert-Dufresne , Jean-Gabriel Young

A challenging problem in complex networks is the network reconstruction problem from data. This work deals with a class of networks denoted as conserved networks, in which a flow associated with every edge and the flows are conserved at all…

Machine Learning · Computer Science 2020-04-14 Satya Jayadev P. , Shankar Narasimhan , Nirav Bhatt

We address the problem of link reciprocity, the non-random presence of two mutual links between pairs of vertices. We propose a new measure of reciprocity that allows the ordering of networks according to their actual degree of correlation…

Disordered Systems and Neural Networks · Physics 2007-05-23 Diego Garlaschelli , Maria I. Loffredo

Conductivity imaging represents one of the most important tasks in medical imaging. In this work we develop a neural network based reconstruction technique for imaging the conductivity from the magnitude of the internal current density. It…

Numerical Analysis · Mathematics 2022-06-29 Bangti Jin , Xiyao Li , Xiliang Lu

Networks are powerful instruments to study complex phenomena, but they become hard to analyze in data that contain noise. Network backbones provide a tool to extract the latent structure from noisy networks by pruning non-salient edges. We…

Physics and Society · Physics 2017-01-26 Michele Coscia , Frank Neffke

Network analysis is currently used in a myriad of contexts: from identifying potential drug targets to predicting the spread of epidemics and designing vaccination strategies, and from finding friends to uncovering criminal activity.…

Data Analysis, Statistics and Probability · Physics 2010-04-28 R. Guimera , M. Sales-Pardo

Recurrence networks are powerful tools used effectively in the nonlinear analysis of time series data. The analysis in this context is done mostly with unweighted and undirected complex networks constructed with specific criteria from the…

Chaotic Dynamics · Physics 2017-09-18 Rinku Jacob , K. P. Harikrishnan , R. Misra , G. Ambika

This paper proposes a method for reconstructing three-dimensional turbulent flows from sparse measurements without the need for ground truth data during training. A weight-sharing network is developed to infer the full flow fields from…

Fluid Dynamics · Physics 2026-03-11 Yaxin Mo , Luca Magri

Complex network reconstruction is a hot topic in many fields. Currently, the most popular data-driven reconstruction framework is based on lasso. However, it is found that, in the presence of noise, lasso loses efficiency for weighted…

Machine Learning · Statistics 2020-03-03 Shuang Xu , Chun-Xia Zhang , Pei Wang , Jiangshe Zhang