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The development of science has been transforming man's view towards nature for centuries. Observing structures and patterns in an effective approach to discover regularities from data is a key step toward theory-building. With increasingly…

Computational Physics · Physics 2025-06-09 Guang-Xing Li

Fully coherent searches (over realistic ranges of parameter space and year-long observation times) for unknown sources of continuous gravitational waves are computationally prohibitive. Less expensive hierarchical searches divide the data…

General Relativity and Quantum Cosmology · Physics 2009-10-27 Holger J. Pletsch , Bruce Allen

We present an analytical method to quantify clustering in super-resolution localization images of static surfaces in two dimensions. The method also describes how over-counting of labeled molecules contributes to apparent self-clustering…

Biological Physics · Physics 2012-03-13 Sarah Veatch , Benjamin Machta , Sarah Shelby , Ethan Chiang , David Holowka , Barbara Baird

The problems of sensor configuration and activation for the detection of correlated random fields using large sensor arrays are considered. Using results that characterize the large-array performance of sensor networks in this application,…

Information Theory · Computer Science 2007-07-16 Youngchul Sung , Lang Tong , H. Vincent Poor

This paper proposes a new paradigm and computational framework for identification of correspondences between sub-structures of distinct composite systems. For this, we define and investigate a variant of traditional data clustering, termed…

Machine Learning · Computer Science 2007-05-23 Zvika Marx , Ido Dagan , Joachim Buhmann

Structural covariance analysis is a widely used structural MRI analysis method which characterises the co-relations of morphology between brain regions over a group of subjects. To our knowledge, little has been investigated in terms of the…

Neurons and Cognition · Quantitative Biology 2020-06-01 Jona Carmon , Jil Heege , Joe H Necus , Thomas W Owen , Gordon Pipa , Marcus Kaiser , Peter N Taylor , Yujiang Wang

We present a novel approach to image restoration that leverages ideas from localized structured prediction and non-linear multi-task learning. We optimize a penalized energy function regularized by a sum of terms measuring the distance…

Machine Learning · Computer Science 2020-06-17 Thomas Eboli , Alex Nowak-Vila , Jian Sun , Francis Bach , Jean Ponce , Alessandro Rudi

In biological and medical research, scientists now routinely acquire microscopy images of hundreds of morphologically heterogeneous organoids and are then faced with the task of finding patterns in the image collection, i.e., subsets of…

Computer Vision and Pattern Recognition · Computer Science 2024-03-21 Jannik Presberger , Rashmiparvathi Keshara , David Stein , Yung Hae Kim , Anne Grapin-Botton , Bjoern Andres

Multiparticle entanglement is a valuable resource for quantum technologies, including measurement based quantum computing, quantum secret sharing, and a variety of quantum sensing applications. The direct way to detect this resource is to…

Quantum Physics · Physics 2025-10-28 Dian Wu , Fei Shi , Jia-Cheng Sun , Bo-Wen Wang , Xue-Mei Gu , Giulio Chiribella , Qi Zhao , Jian Wu

Studies of large-scale structures in the Universe, such as superstructures or cosmic voids, have been widely used to characterize the properties of the cosmic web through statistical analyses. On the other hand, the 2-point correlation…

Cosmology and Nongalactic Astrophysics · Physics 2020-05-04 M. V. Santucho , H. E. Luparello , M. Lares , D. G. Lambas , A. N. Ruiz , M. A. Sgró

To quantify spatial protein-protein proximity (colocalization) in fluorescence microscopic images, cross-correlation and autocorrelation functions were decomposed into fast and slowly decaying components. The fast component results from…

Biological Physics · Physics 2009-11-13 Yong Wu , Mansoureh Eghbali , Jimmy Ou , Min Li , Ligia Toro , Enrico Stefani

We address the question whether the sequence of areas between coalescing random walkers displays multiscaling and in the process calculate the second moment as well as the two point correlation function exactly. The scaling of higher order…

Statistical Mechanics · Physics 2007-06-13 Peter Welinder , Gunnar Pruessner , Kim Christensen

To construct models of large, multivariate complex systems, such as those in biology, one needs to constrain which variables are allowed to interact. This can be viewed as detecting "local" structures among the variables. In the context of…

Data Analysis, Statistics and Probability · Physics 2023-10-19 Mahajabin Rahman , Ilya Nemenman

Feature selection has been proven a powerful preprocessing step for high-dimensional data analysis. However, most state-of-the-art methods tend to overlook the structural correlation information between pairwise samples, which may…

Machine Learning · Computer Science 2019-07-02 Lu Bai , Lixin Cui , Yue Wang , Philip S. Yu , Edwin R. Hancock

Recently, the quantification of errors in the stochastic homogenization of divergence-form operators has witnessed important progress. Our aim now is to go beyond error bounds, and give precise descriptions of the effect of the randomness,…

Analysis of PDEs · Mathematics 2016-09-29 Jean-Christophe Mourrat , Felix Otto

The statistical properties of local alignment algorithms with gaps are analyzed theoretically for uncorrelated and correlated DNA sequences. In the vicinity of the log-linear phase transition, the statistics of alignment with gaps is shown…

Statistical Mechanics · Physics 2007-05-23 Terence Hwa , Michael Lassig

Fluorescence microscopy is indispensable in nanoscience and biological sciences. The versatility of labeling target structures with fluorescent dyes permits to visualize structure and function at a subcellular resolution with a wide field…

Community detection algorithms attempt to find the best clusters of nodes in an arbitrary complex network. Multi-scale ("multiresolution") community detection extends the problem to identify the best network scale(s) for these clusters. The…

Physics and Society · Physics 2015-06-11 Peter Ronhovde , Zohar Nussinov

A power constrained sensor network that consists of multiple sensor nodes and a fusion center (FC) is considered, where the goal is to estimate a random parameter of interest. In contrast to the distributed framework, the sensor nodes may…

Information Theory · Computer Science 2012-07-03 Swarnendu Kar , Pramod K. Varshney

The most common statistic used to analyze large-scale structure surveys is the correlation function, or power spectrum. Here, we show how `slicing' the correlation function on local density brings sensitivity to interesting non-Gaussian…

Cosmology and Nongalactic Astrophysics · Physics 2018-05-15 Mark C. Neyrinck , István Szapudi , Nuala McCullagh , Alex Szalay , Bridget Falck , Jie Wang