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Strings in the real world are often encoded with some level of uncertainty. In the character-level uncertainty model, an uncertain string $X$ of length $n$ on an alphabet $\Sigma$ is a sequence of $n$ probability distributions over…

Data Structures and Algorithms · Computer Science 2024-03-22 Esteban Gabory , Chang Liu , Grigorios Loukides , Solon P. Pissis , Wiktor Zuba

In this note we present a characterisation of all unary and binary patterns that do not only contain variables, but also reversals of their instances. These types of variables were studied recently in either more general or particular…

Formal Languages and Automata Theory · Computer Science 2015-08-20 Robert Mercaş

A novel quickest detection setting is proposed which is a generalization of the well-known Bayesian change-point detection model. Suppose \{(X_i,Y_i)\}_{i\geq 1} is a sequence of pairs of random variables, and that S is a stopping time with…

Statistics Theory · Mathematics 2016-11-17 Urs Niesen , Aslan Tchamkerten

The parameterized matching problem is a variant of string matching, which is to search for all parameterized occurrences of a pattern $P$ in a text $T$. In considering matching algorithms, the combinatorial natures of strings, especially…

Data Structures and Algorithms · Computer Science 2023-06-21 Haruki Ideguchi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

In this paper we consider word equations with one variable (and arbitrary many appearances of it). A recent technique of recompression, which is applicable to general word equations, is shown to be suitable also in this case. While in…

Formal Languages and Automata Theory · Computer Science 2014-01-23 Artur Jeż

The Karp-Rabin fingerprint of a string is a type of hash value that due to its strong properties has been used in many string algorithms. In this paper we show how to construct a data structure for a string $S$ of size $N$ compressed by a…

Data Structures and Algorithms · Computer Science 2013-05-17 Philip Bille , Patrick Hagge Cording , Inge Li Gørtz , Benjamin Sach , Hjalte Wedel Vildhøj , Søren Vind

We consider the problem of indexing a string $t$ of length $n$ to report the occurrences of a query pattern $p$ containing $m$ characters and $j$ wildcards. Let $occ$ be the number of occurrences of $p$ in $t$, and $\sigma$ the size of the…

Data Structures and Algorithms · Computer Science 2012-09-07 Philip Bille , Inge Li Goertz , Hjalte Wedel Vildhøj , Søren Vind

The classic string indexing problem is to preprocess a string $S$ into a compact data structure that supports efficient subsequent pattern matching queries, that is, given a pattern string $P$, report all occurrences of $P$ within $S$. In…

Data Structures and Algorithms · Computer Science 2024-02-15 Philip Bille , Inge Li Gørtz , Max Rishøj Pedersen , Eva Rotenberg , Teresa Anna Steiner

A composition of a nonnegative integer (n) is a sequence of positive integers whose sum is (n). A composition is palindromic if it is unchanged when its terms are read in reverse order. We provide a generating function for the number of…

Combinatorics · Mathematics 2007-05-23 Sergey Kitaev , Tyrrell B. McAllister , T. Kyle Petersen

An $(n,r,s)$-system is an $r$-uniform hypergraph on $n$ vertices such that every pair of edges has an intersection of size less than $s$. Using probabilistic arguments, R\"{o}dl and \v{S}i\v{n}ajov\'{a} showed that for all fixed integers…

Combinatorics · Mathematics 2021-06-11 Xizhi Liu , Dhruv Mubayi

The order preserving pattern matching (OPPM) problem is, given a pattern string $p$ and a text string $t$, find all substrings of $t$ which have the same relative orders as $p$. In this paper, we consider two variants of the OPPM problem…

Data Structures and Algorithms · Computer Science 2017-07-26 Temma Nakamura , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

Given a text $T$ of length $n$ and a pattern $P$ of length $m$, the string matching problem is a task to find all occurrences of $P$ in $T$. In this study, we propose an algorithm that solves this problem in $O((n + m)q)$ time considering…

Data Structures and Algorithms · Computer Science 2020-04-14 Satoshi Kobayashi , Diptarama Hendrian , Ryo Yoshinaka , Ayumi Shinohara

Given an arbitrary matrix $A\in\mathbb{R}^{n\times n}$, we consider the fundamental problem of computing $Ax$ for any $x\in\mathbb{R}^n$ such that $Ax$ is $s$-sparse. While fast algorithms exist for particular choices of $A$, such as the…

Computational Complexity · Computer Science 2021-05-14 Tim Fuchs , David Gross , Felix Krahmer , Richard Kueng , Dustin G. Mixon

The convolution between a text string $S$ of length $N$ and a pattern string $P$ of length $m$ can be computed in $O(N \log m)$ time by FFT. It is known that various types of approximate string matching problems are reducible to…

Data Structures and Algorithms · Computer Science 2013-03-19 Toshiya Tanaka , Tomohiro I , Shunsuke Inenaga , Hideo Bannai , Masayuki Takeda

In the Palindrome Problem one tries to find all palindromes (palindromic substrings) in a given string. A palindrome is defined as a string which reads forwards the same as backwards, e.g., the string "racecar". A related problem is the…

Data Structures and Algorithms · Computer Science 2016-01-29 Petra Berenbrink , Funda Ergün , Frederik Mallmann-Trenn , Erfan Sadeqi Azer

We formulate the sparse classification problem of $n$ samples with $p$ features as a binary convex optimization problem and propose a cutting-plane algorithm to solve it exactly. For sparse logistic regression and sparse SVM, our algorithm…

Optimization and Control · Mathematics 2025-01-08 Dimitris Bertsimas , Jean Pauphilet , Bart Van Parys

The Binary Jumbled String Matching problem is defined as: Given a string $s$ over $\{a,b\}$ of length $n$ and a query $(x,y)$, with $x,y$ non-negative integers, decide whether $s$ has a substring $t$ with exactly $x$ $a$'s and $y$ $b$'s.…

Data Structures and Algorithms · Computer Science 2013-06-03 Golnaz Badkobeh , Gabriele Fici , Steve Kroon , Zsuzsanna Lipták

The online square detection problem is to detect the first occurrence of a square in a string whose characters are provided as input one at a time. Recall that a square is a string that is a concatenation of two identical strings. In this…

Data Structures and Algorithms · Computer Science 2014-11-10 Dmitry Kosolobov

We consider the well-studied pattern counting problem: given a permutation $\pi \in \mathbb{S}_n$ and an integer $k > 1$, count the number of order-isomorphic occurrences of every pattern $\tau \in \mathbb{S}_k$ in $\pi$. Our first result…

Data Structures and Algorithms · Computer Science 2024-07-09 Gal Beniamini , Nir Lavee

A polynomial time algorithm which detects all paths and cycles of all lengths in form of vertex pairs (start, finish).

Discrete Mathematics · Computer Science 2007-09-10 Sergey Gubin