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Persistent homology is a powerful tool for characterizing the topology of a data set at various geometric scales. When applied to the description of molecular structures, persistent homology can capture the multiscale geometric features and…

Quantitative Methods · Quantitative Biology 2018-07-31 Zixuan Cang , Guo-Wei Wei

In this paper, we consider boundary extensions of two classes of mappings between metric measure spaces. These two mapping classes extend in particular the well-studied geometric mappings such as quasiregular mappings with integrable…

Complex Variables · Mathematics 2024-03-20 Yao-Lan Tian , Yi Xuan

A method to apply and visualize persistent homology of time series is proposed. The method captures persistent features in space and time, in contrast to the existing procedures, where one usually chooses one while keeping the other fixed.…

Algebraic Topology · Mathematics 2024-12-17 Martina Flammer , Knut Hüper

We define a simple, explicit map sending a morphism $f:M \rightarrow N$ of pointwise finite dimensional persistence modules to a matching between the barcodes of $M$ and $N$. Our main result is that, in a precise sense, the quality of this…

Algebraic Topology · Mathematics 2016-10-25 Ulrich Bauer , Michael Lesnick

The theory of multidimensional persistent homology was initially developed in the discrete setting, and involved the study of simplicial complexes filtered through an ordering of the simplices. Later, stability properties of…

Computational Geometry · Computer Science 2013-03-28 Niccolò Cavazza , Marc Ethier , Patrizio Frosini , Tomasz Kaczynski , Claudia Landi

A vector topology on a vector space over a topological field is a (not necessarily Hausdorff) topology by which the addition and scalar multiplication are continuous. We prove that, if an isomorphism between the lattice of topologies of two…

General Topology · Mathematics 2025-01-24 Takanobu Aoyama

In topological data analysis, we want to discern topological and geometric structure of data, and to understand whether or not certain features of data are significant as opposed to simply random noise. While progress has been made on…

Computational Geometry · Computer Science 2020-01-10 So Mang Han , Taylor Okonek , Nikesh Yadav , Xiaojun Zheng

When filtering a topological space by a single parameter, the theory of quiver representations provides a complete framework for decomposing the resulting persistence module to obtain its barcode. This is achieved by interpreting the…

Representation Theory · Mathematics 2025-07-29 Yariana Diaz

The Extended Persistent Homology Transform (XPHT) is a topological transform which takes as input a shape embedded in Euclidean space, and to each unit vector assigns the extended persistence module of the height function over that shape…

Algebraic Topology · Mathematics 2022-09-01 Katharine Turner , Vanessa Robins , James Morgan

Most research into similarity search in metric spaces relies upon the triangle inequality property. This property allows the space to be arranged according to relative distances to avoid searching some subspaces. We show that many common…

Information Retrieval · Computer Science 2017-03-03 Richard Connor , Franco Alberto Cardillo , Lucia Vadicamo , Fausto Rabitti

A central challenge in topological data analysis is the interpretation of barcodes. The classical algebraic-topological approach to interpreting homology classes is to build maps to spaces whose homology carries semantics we understand and…

Algebraic Topology · Mathematics 2023-08-11 Iris H. R. Yoon , Robert Ghrist , Chad Giusti

Multiparameter persistence modules can be uniquely decomposed into indecomposable summands. Among these indecomposables, intervals stand out for their simplicity, making them preferable for their ease of interpretation in practical…

Algebraic Topology · Mathematics 2024-03-19 Ángel Javier Alonso , Michael Kerber , Primoz Skraba

A fundamental tool in topological data analysis is persistent homology, which allows extraction of information from complex datasets in a robust way. Persistent homology assigns a module over a principal ideal domain to a one-parameter…

Algebraic Topology · Mathematics 2019-06-19 Heather A. Harrington , Nina Otter , Hal Schenck , Ulrike Tillmann

An important problem in the field of Topological Data Analysis is defining topological summaries which can be combined with traditional data analytic tools. In recent work Bubenik introduced the persistence landscape, a stable…

Algebraic Topology · Mathematics 2018-12-27 Oliver Vipond

Multiplexed imaging allows multiple cell types to be simultaneously visualised in a single tissue sample, generating unprecedented amounts of spatially-resolved, biological data. In topological data analysis, persistent homology provides…

Quantitative Methods · Quantitative Biology 2025-05-06 Maria Torras-Pérez , Iris H. R. Yoon , Praveen Weeratunga , Ling-Pei Ho , Helen M. Byrne , Ulrike Tillmann , Heather A. Harrington

We define bigraded persistent homology modules and bigraded barcodes of a finite pseudo-metric space X using the ordinary and double homology of the moment-angle complex associated with the Vietoris-Rips filtration of X. We prove a…

Algebraic Topology · Mathematics 2025-09-09 Anthony Bahri , Ivan Limonchenko , Taras Panov , Jongbaek Song , Donald Stanley

In this paper, we explore the role of network topology on maintaining the extensive property of entropy. We study analytically and numerically how the topology contributes to maintaining extensivity of entropy in multiplex networks, i.e.…

Chaotic Dynamics · Physics 2017-04-17 Chris G. Antonopoulos , Murilo S. Baptista

Exterior powers play important roles in persistent homology in computational geometry. In the present paper we study the problem of extracting the $K$ longest intervals of the exterior-power layers of a tame persistence module. We prove a…

Computational Geometry · Computer Science 2025-12-24 Yoshihiro Maruyama

Persistent (co)homology is a central construction in topological data analysis, where it is used to quantify prominence of features in data to produce stable descriptors suitable for downstream analysis. Persistence is challenging to…

Computational Geometry · Computer Science 2024-10-23 Arnur Nigmetov , Dmitriy Morozov

Computation of the interleaving distance between persistence modules is a central task in topological data analysis. For $1$-parameter persistence modules, thanks to the isometry theorem, this can be done by computing the bottleneck…

Computational Geometry · Computer Science 2019-10-07 Tamal K. Dey , Cheng Xin
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