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The accurate prediction of biological features from genomic data is paramount for precision medicine and sustainable agriculture. For decades, neural network models have been widely popular in fields like computer vision, astrophysics and…

Genomics · Quantitative Biology 2022-03-15 Zhaoyi Zhang , Songyang Cheng , Claudia Solis-Lemus

Recently, a large number of neural mechanisms and models have been proposed for sequence learning, of which self-attention, as exemplified by the Transformer model, and graph neural networks (GNNs) have attracted much attention. In this…

Computation and Language · Computer Science 2018-11-22 Pengfei Liu , Shuaichen Chang , Xuanjing Huang , Jian Tang , Jackie Chi Kit Cheung

Lexical normalisation (LN) is the process of correcting each word in a dataset to its canonical form so that it may be more easily and more accurately analysed. Most lexical normalisation systems operate at the character-level, while…

Computation and Language · Computer Science 2019-11-15 Michael Stewart , Wei Liu , Rachel Cardell-Oliver

While part-of-speech (POS) tagging and dependency parsing are observed to be closely related, existing work on joint modeling with manually crafted feature templates suffers from the feature sparsity and incompleteness problems. In this…

Computation and Language · Computer Science 2017-04-26 Liner Yang , Meishan Zhang , Yang Liu , Nan Yu , Maosong Sun , Guohong Fu

This paper reviews concepts, modeling approaches, and recent findings along a spectrum of different levels of abstraction of neural network models including generalization across (1) Samples, (2) Distributions, (3) Domains, (4) Tasks, (5)…

Machine Learning · Computer Science 2024-08-02 Chris Rohlfs

Modeling the parser state is key to good performance in transition-based parsing. Recurrent Neural Networks considerably improved the performance of transition-based systems by modelling the global state, e.g. stack-LSTM parsers, or local…

Computation and Language · Computer Science 2020-10-22 Ramon Fernandez Astudillo , Miguel Ballesteros , Tahira Naseem , Austin Blodgett , Radu Florian

Graph structure learning is a well-established problem that aims at optimizing graph structures adaptive to specific graph datasets to help message passing neural networks (i.e., GNNs) to yield effective and robust node embeddings. However,…

Machine Learning · Computer Science 2023-06-21 Wentao Zhao , Qitian Wu , Chenxiao Yang , Junchi Yan

Transfer learning is a vital technique that generalizes models trained for one setting or task to other settings or tasks. For example in speech recognition, an acoustic model trained for one language can be used to recognize speech in…

Computation and Language · Computer Science 2015-11-20 Dong Wang , Thomas Fang Zheng

Neural networks have been successfully applied in applications with a large amount of labeled data. However, the task of rapid generalization on new concepts with small training data while preserving performances on previously learned ones…

Machine Learning · Computer Science 2017-06-09 Tsendsuren Munkhdalai , Hong Yu

Global sentence information is crucial for sequence labeling tasks, where each word in a sentence must be assigned a label. While BiLSTM models are widely used, they often fail to capture sufficient global context for inner words. Previous…

Computation and Language · Computer Science 2025-07-08 Conglei Xu , Kun Shen , Hongguang Sun , Yang Xu

In many real applications of statistical learning, collecting sufficiently many training data is often expensive, time-consuming, or even unrealistic. In this case, a transfer learning approach, which aims to leverage knowledge from a…

Machine Learning · Statistics 2025-02-26 Baozhen Wang , Xingye Qiao

Graph neural networks (GNNs) are the most widely adopted model in graph-structured data oriented learning and representation. Despite their extraordinary success in real-world applications, understanding their working mechanism by theory is…

Machine Learning · Computer Science 2023-05-16 Huayi Tang , Yong Liu

Fine-tuning pretrained language models has shown promising results on a wide range of tasks, but when encountering a novel task, do they rely more on generic pretrained representation, or develop brand new task-specific solutions? Here, we…

Machine Learning · Computer Science 2024-06-28 Dongyan Lin

Natural language processing (NLP) tasks tend to suffer from a paucity of suitably annotated training data, hence the recent success of transfer learning across a wide variety of them. The typical recipe involves: (i) training a deep,…

Computation and Language · Computer Science 2019-09-11 Lyan Verwimp , Jerome R. Bellegarda

Foundation models are pretrained on large-scale corpora to learn generalizable patterns across domains and tasks -- such as contours, textures, and edges in images, or tokens and sentences in text. In contrast, discovering such generalities…

Machine Learning · Computer Science 2025-05-27 Zehong Wang , Zheyuan Zhang , Tianyi Ma , Nitesh V Chawla , Chuxu Zhang , Yanfang Ye

This work studies the global convergence and implicit bias of Gauss Newton's (GN) when optimizing over-parameterized one-hidden layer networks in the mean-field regime. We first establish a global convergence result for GN in the…

Machine Learning · Computer Science 2023-12-13 Michael Arbel , Romain Menegaux , Pierre Wolinski

Transfer learning has emerged as a powerful technique in many application problems, such as computer vision and natural language processing. However, this technique is largely ignored in application to genetic data analysis. In this paper,…

Applications · Statistics 2022-06-22 Jinghang Lin , Shan Zhang , Qing Lu

Transfer learning has emerged as a highly sought-after and actively pursued research area within the statistical community. The core concept of transfer learning involves leveraging insights and information from auxiliary datasets to…

Methodology · Statistics 2024-08-01 Pengfei Li , Tao Yu , Chixiang Chen , Jing Qin

Deep neural networks produce state-of-the-art results when trained on a large number of labeled examples but tend to overfit when small amounts of labeled examples are used for training. Creating a large number of labeled examples requires…

Computer Vision and Pattern Recognition · Computer Science 2021-09-13 Attaullah Sahito , Eibe Frank , Bernhard Pfahringer

Existing generalization bounds fail to explain crucial factors that drive the generalization of modern neural networks. Since such bounds often hold uniformly over all parameters, they suffer from over-parametrization and fail to account…

Machine Learning · Statistics 2023-11-14 Songyan Hou , Parnian Kassraie , Anastasis Kratsios , Andreas Krause , Jonas Rothfuss